RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GTF2A2P52657 109 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ELAVL2Q12926 359 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GXYLT1Q4G148 440 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 CAPN13Q6MZZ7 669 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 DNAJC19Q96DA6 116 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ASB9Q96DX5 294 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 HBEGFQ99075 208 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF649Q9BS31 505 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ANKHQ9HCJ1 492 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 NR2E3Q9Y5X4 410 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ARPC2O15144 300 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 SSX5O60225 188 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 C22orf31O95567 290 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 CTSEP14091 401 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RPS2P15880 293 aaKnown RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 HSD3B2P26439 372 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF155Q12901 538 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ARSHQ5FYA8 562 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TCEAL6Q6IPX3 200 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ADGRD2Q7Z7M1 963 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 SLC51AQ86UW1 340 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RAVER1Q8IY67 606 aaKnown RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 PIAS4Q8N2W9 510 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 AZIN2Q96A70 460 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 SLC7A6OSQ96CW6 309 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 KCTD15Q96SI1 283 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RTFDC1Q9BY42 306 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TMX2Q9Y320 296 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 AQP12BA6NM10 295 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TSPAN1O60635 241 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 IFNA21P01568 189 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ACVR2AP27037 513 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 GBX2P52951 348 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 GTF2BQ00403 316 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 HSPB3Q12988 150 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 GFOD2Q3B7J2 385 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ANKS1BQ7Z6G8 1248 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TMED4Q7Z7H5 227 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 AQP12AQ8IXF9 295 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 GJD3Q8N144 294 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 COQ8BQ96D53 544 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TCEAL4Q96EI5 215 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 FBXL20Q96IG2 436 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 HSPA12BQ96MM6 686 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 KANSL3Q9P2N6 904 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TRPV2Q9Y5S1 764 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 SMIM30A4D0T7 59 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 IQCF5A8MTL0 148 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RECQL4O94761 1208 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 PKMP14618 531 aaKnown RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 IGFALSP35858 605 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 FSTL4Q6MZW2 842 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 KCTD9Q7L273 389 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 COPS8Q99627 209 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TIGARQ9NQ88 270 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 OSER1Q9NX31 292 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 PAQR5Q9NXK6 330 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 DNMT3LQ9UJW3 386 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 FBXL3Q9UKT7 428 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 LRRC42Q9Y546 428 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF705EA8MWA4 302 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ITGA10O75578 1167 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RYKP34925 604 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 MEP1AQ16819 746 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 FBXO43Q4G163 708 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 NIPA1Q7RTP0 329 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 ARRDC4Q8NCT1 418 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 OR10G6Q8NH81 332 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 COQ3Q9NZJ6 369 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 RNF6Q9Y252 685 aa9.65□□□□□ -0.86
COL4A6-201ENST00000334504 TIMM8BQ9Y5J9 83 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-201ENST00000334504 CLTCL1P53675 1640 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 MFSD11O43934 449 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 RASGRP1O95267 797 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 FCER2P06734 321 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 GSTT2P0CG29 244 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 AXLP30530 894 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 MVKQ03426 396 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 KIAA1324Q6UXG2 1013 aaKnown RBP9.65□□□□□ -0.87
COL4A6-201ENST00000334504 RASGEF1AQ8N9B8 481 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 ZMIZ2Q8NF64 920 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 SLC13A3Q8WWT9 602 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 CREB3L1Q96BA8 519 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 DUSP16Q9BY84 665 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 CD93Q9NPY3 652 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 HCN2Q9UL51 889 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 ADCY10Q96PN6 1610 aa9.65□□□□□ -0.87
COL4A6-201ENST00000334504 H0YJX3 145 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ITM2AO43736 263 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SLITRK5O94991 958 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 APOC3P02656 99 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 EDNRAP25101 427 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 DNAJA1P31689 397 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MATKP42679 507 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms