RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 OR52E6Q96RD3 313 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 C2orf49Q9BVC5 232 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 USP21Q9UK80 565 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 TO15178 435 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 MITFO75030 526 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 HPRP00739 348 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 POLR2JP52435 117 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 NDST1P52848 882 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 QRICH1Q2TAL8 776 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ARSJQ5FYB0 599 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 CRTC1Q6UUV9 634 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 SNX18Q96RF0 628 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 LRRC3Q9BY71 257 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM83DQ9H4H8 585 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 TM9SF3Q9HD45 589 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ACTR3BQ9P1U1 418 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 C13orf42A0A1B0GVH6 325 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 RHPN2P1A8MT19 583 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ERVV-1B6SEH8 477 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 OTCP00480 354 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 HLA-EP13747 358 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 CERS1P27544 350 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 BCAT1P54687 386 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 TLR8Q9NR97 1041 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 CNOT6Q9ULM6 557 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ROBO3Q96MS0 1386 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 BBOX1O75936 387 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 INMTO95050 263 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ATE1O95260 518 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 PAPSS2O95340 614 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 CHRNA5P30532 468 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 TAF6P49848 677 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ERVK-8P63133 956 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 MFSD10Q14728 455 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 EARS2Q5JPH6 523 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 REP15Q6BDI9 236 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 KANSL1Q7Z3B3 1105 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 EBNA1BP2Q99848 306 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 ENY2Q9NPA8 101 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 TMEM98Q9Y2Y6 226 aa10.19□□□□□ -0.78
SPTBN1-201ENST00000333896 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 OR6C6A6NF89 314 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 H7C4K7 107 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 LINC00032P0C843 101 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 GNB3P16520 340 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 DCKP27707 260 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 AXLP30530 894 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 XRRA1Q6P2D8 792 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC9A9Q8IVB4 645 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 KXD1Q9BQD3 176 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 FUNDC2Q9BWH2 189 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 TMEM184CQ9NVA4 438 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RFXANKO14593 260 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MAPK3P27361 379 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ADH6P28332 368 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 LUMP51884 338 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ESCO2Q56NI9 601 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MOB1BQ7L9L4 216 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC44A5Q8NCS7 719 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 COQ8BQ96D53 544 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MED31Q9Y3C7 131 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 M0R129 80 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 HGFP14210 728 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RENBPP51606 427 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CHAF1BQ13112 559 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 DAG1Q14118 895 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MARC1Q5VT66 337 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 XKR5Q6UX68 686 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF709Q8N972 641 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SLCO2A1Q92959 643 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 EIF5A2Q9GZV4 153 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 PAK1IP1Q9NWT1 392 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF335Q9H4Z2 1342 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF407Q9C0G0 2248 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MOXD2PA6NHM9 499 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RIIAD1A6NNX1 92 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 POLR1CO15160 346 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 TFEBP19484 476 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 FNTBP49356 437 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CASP9P55211 416 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 GPRIN3Q6ZVF9 776 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ADGRF2Q8IZF7 708 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 C1orf216Q8TAB5 229 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RXFP2Q8WXD0 754 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 C1QTNF7Q9BXJ2 289 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 C11orf16Q9NQ32 467 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 HOXA2O43364 376 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 RASAL1O95294 804 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 HMGN1P05114 100 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 PRKCAP17252 672 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 DNAJB1P25685 340 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CDH5P33151 784 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MSX2P35548 267 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms