RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PARP16Q8N5Y8 322 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 OR6P1Q8NGX9 317 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 PABPC5Q96DU9 382 aaKnown RBP17.83■□□□□ 0.45
PKP3-201ENST00000331563 SLC47A1Q96FL8 570 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 NUAK2Q9H093 628 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 ACTR8Q9H981 624 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 PRDM8Q9NQV8 689 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 ST3GAL5Q9UNP4 418 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 PCDHGB1Q9Y5G3 927 aa17.83■□□□□ 0.45
PKP3-201ENST00000331563 MED26O95402 600 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 BMP1P13497 986 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 CRYBB1P53674 252 aaPredicted RBP17.83■□□□□ 0.44
PKP3-201ENST00000331563 AP2S1P53680 142 aaPredicted RBP17.83■□□□□ 0.44
PKP3-201ENST00000331563 PLEKHG6Q3KR16 790 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 ATP6AP1LQ52LC2 224 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 SYT6Q5T7P8 510 aaPredicted RBP17.83■□□□□ 0.44
PKP3-201ENST00000331563 TRAF7Q6Q0C0 670 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 B3GNT8Q7Z7M8 397 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 SVOPLQ8N434 492 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 FBXL6Q8N531 539 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 PTERQ96BW5 349 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 SLC39A13Q96H72 371 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 ANKHQ9HCJ1 492 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 ZNF304Q9HCX3 659 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 ADGRE2Q9UHX3 823 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 DNMT3LQ9UJW3 386 aa17.83■□□□□ 0.44
PKP3-201ENST00000331563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.83■□□□□ 0.449e-8■■□□□ 13.6
PKP3-201ENST00000331563 A0A0G2JMP0 313 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 PTGESO14684 152 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 RGS10O43665 173 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 AIREO43918 545 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 SSX4O60224 188 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 FAM20BO75063 409 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 MASP1P48740 699 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 NDUFV1P49821 464 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 STK11Q15831 433 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 OTUD1Q5VV17 481 aaPredicted RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 FAM122CQ6P4D5 195 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 PJA1Q8NG27 643 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 SOCS4Q8WXH5 440 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 ASB2Q96Q27 587 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 AGO3Q9H9G7 860 aaKnown RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 CARS2Q9HA77 564 aaKnown RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 CRYL1Q9Y2S2 319 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 PCM1Q15154 2024 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 MN1Q10571 1320 aaPredicted RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 MEN1O00255 615 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 PRKD3O94806 890 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 LCKP06239 509 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 FGF4P08620 206 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 FMO4P31512 558 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 SLC9A3P48764 834 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 CDKN2DP55273 166 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 KANK2Q63ZY3 851 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 PNCKQ6P2M8 343 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 CTU1Q7Z7A3 348 aaKnown RBP17.82■□□□□ 0.44
PKP3-201ENST00000331563 AMER2Q8N7J2 671 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 TSPEARQ8WU66 669 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 FAM162AQ96A26 154 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 MIOSQ9NXC5 875 aa17.82■□□□□ 0.44
PKP3-201ENST00000331563 A0A0X1KG70 313 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 PABPN1LA6NDY0 278 aaKnown RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 PIRO00625 290 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 MITFO75030 526 aaPredicted RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 DUSP11O75319 330 aaKnown RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 CD6P30203 668 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 SCNN1AP37088 669 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 HTR3AP46098 478 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 POU6F2P78424 691 aaPredicted RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 YIF1BQ5BJH7 314 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 NOMO2Q5JPE7 1267 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 TMEM207Q6UWW9 146 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 SPATA19Q7Z5L4 167 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 NCLNQ969V3 563 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 MRPL42Q9Y6G3 142 aaKnown RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 LOC100506127A0A0U1RQW1 187 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 CCL22O00626 93 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 ANXA9O76027 345 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 RYKP34925 604 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 LILRA4P59901 499 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 LRRC8DQ7L1W4 858 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 KCTD20Q7Z5Y7 419 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 ADHFE1Q8IWW8 467 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 NLGN4XQ8N0W4 816 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 FNDC5Q8NAU1 212 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 SETD9Q8NE22 299 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 NPY6RQ99463 290 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 THUMPD3Q9BV44 507 aaKnown RBP17.81■□□□□ 0.44
PKP3-201ENST00000331563 ACOT13Q9NPJ3 140 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 DIABLOQ9NR28 239 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 AIG1Q9NVV5 245 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 UCKL1Q9NWZ5 548 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 EHD3Q9NZN3 535 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 PCDHB14Q9Y5E9 798 aa17.81■□□□□ 0.44
PKP3-201ENST00000331563 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms