RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 HPS6Q86YV9 775 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 PIANPQ8IYJ0 282 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 ADGRF3Q8IZF5 1079 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 RNF10Q8N5U6 811 aaKnown RBP17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 CLEC18CQ8NCF0 446 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 ACRBPQ8NEB7 543 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 MIB2Q96AX9 1013 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 CLIP3Q96DZ5 547 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 HES6Q96HZ4 224 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 TRAPPC9Q96Q05 1148 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 TMEM121Q9BTD3 319 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 ACTR5Q9H9F9 607 aaPredicted RBP17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 SMARCAL1Q9NZC9 954 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 SNX7Q9UNH6 387 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 DOPEY2Q9Y3R5 2298 aa17.16■□□□□ 0.34
PTPMT1-201ENST00000326656 K7EM74 188 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 DDX3YO15523 660 aaKnown RBP17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 KDM1AO60341 852 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 CD63P08962 238 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ST6GAL1P15907 406 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 PGDP52209 483 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 RPS18P62269 152 aaKnown RBP17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 CDH17Q12864 832 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ZNF789Q5FWF6 425 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 NLRP9Q7RTR0 991 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 OR1L3Q8NH93 324 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ADAMTS17Q8TE56 1095 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 TCTN2Q96GX1 697 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 RUFY1Q96T51 708 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 C17orf62Q9BQA9 187 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 DHRS4Q9BTZ2 278 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 SLC25A23Q9BV35 468 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ING2Q9H160 280 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ACSS2Q9NR19 701 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 PCMTD2Q9NV79 361 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 ACTR10Q9NZ32 417 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 OR6C2Q9NZP2 312 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 TCFL5Q9UL49 500 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 AP1M2Q9Y6Q5 423 aa17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 USP9YO00507 2555 aaPredicted RBP17.15■□□□□ 0.34
PTPMT1-201ENST00000326656 HEATR9A2RTY3 570 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 TMEM150CB9EJG8 249 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 E7EQ34 232 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 CEACAM4O75871 244 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 SUN1O94901 812 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 AGXTP21549 392 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 ACADLP28330 430 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 ITGA1P56199 1179 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 ABRQ12979 859 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 PRKG2Q13237 762 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 IL10RAQ13651 578 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 SPESP1Q6UW49 350 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 MED25Q71SY5 747 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 HOOK3Q86VS8 718 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 GPR135Q8IZ08 494 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 TMEM102Q8N9M5 508 aaPredicted RBP17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 PEX13Q92968 403 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 SGSM3Q96HU1 749 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 RBSNQ9H1K0 784 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 IMPACTQ9P2X3 320 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 G3BP2Q9UN86 482 aaKnown RBP17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 ASF1AQ9Y294 204 aa17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 R3HDM2Q9Y2K5 976 aaKnown RBP17.14■□□□□ 0.33
PTPMT1-201ENST00000326656 MED13Q9UHV7 2174 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 USP9XQ93008 2570 aaPredicted RBP17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 NR1D1P20393 614 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 FDFT1P37268 417 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 RRADP55042 308 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 GDF10P55107 478 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 SRSF1Q07955 248 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 SYTL1Q8IYJ3 562 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 ENDOVQ8N8Q3 282 aaKnown RBP17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 DNAAF3Q8N9W5 541 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 OR5K2Q8NHB8 316 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 ELMO1Q92556 727 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 IP6K3Q96PC2 410 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 RANBP9Q96S59 729 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 HGH1Q9BTY7 390 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 PADI2Q9Y2J8 665 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 ZNF451Q9Y4E5 1061 aa17.13■□□□□ 0.33
PTPMT1-201ENST00000326656 SLC5A10A0PJK1 596 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 CCDC162PA2VCL2 907 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 ARGFXA6NJG6 315 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 DNAJB5O75953 348 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 TMEM63AO94886 807 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 FTCDO95954 541 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 CAPN1P07384 714 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 ADRA1DP25100 572 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 FOXN2P32314 431 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 CCL11P51671 97 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 ACVR1Q04771 509 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms