RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PGBD5Q8N414 524 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 SVOPQ8N4V2 548 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 MUSKO15146 869 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 ATF6P18850 670 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 PRKCQQ04759 706 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 NCEH1Q6PIU2 408 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 OR4A15Q8NGL6 344 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 PPCDCQ96CD2 204 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 NLNQ9BYT8 704 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 TEX28O15482 410 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 SUV39H1O43463 412 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CAPGP40121 348 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ADARP55265 1226 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CDH15P55291 814 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 EMX2Q04743 252 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PPP1R8Q12972 351 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 RFX4Q33E94 735 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PTCHD3Q3KNS1 767 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 MDGA1Q8NFP4 955 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 DACT3Q96B18 629 aaPredicted RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 BBS4Q96RK4 519 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 C1QTNF1Q9BXJ1 281 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 WNT6Q9Y6F9 365 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 SOCS5O75159 536 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PRNPP04156 253 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CLCN4P51793 760 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CYP4F2P78329 520 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PTGR1Q14914 329 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TLR1Q15399 786 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 LSMEM2Q8N112 164 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CORO2BQ9UQ03 480 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 H3BNX3 289 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 GPR39O43194 453 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 MAN1A2O60476 641 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CNOT3O75175 753 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TRMUO75648 421 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ASLP04424 464 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 RXRGP48443 463 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TOP3AQ13472 1001 aaPredicted RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PDCD4Q53EL6 469 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 GPRC6AQ5T6X5 926 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 KBTBD2Q8IY47 623 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 GPR150Q8NGU9 434 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ISL2Q96A47 359 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 BOCQ9BWV1 1114 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CD244Q9BZW8 370 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 EPS8L2Q9H6S3 715 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 CAPN10Q9HC96 672 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 MANBAO00462 879 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PER2O15055 1255 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 SERPINA1P01009 418 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PGRP06401 933 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ATP1B2P14415 290 aaPredicted RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 TYRP14679 529 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PRKAG1P54619 331 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 NANOGP8Q6NSW7 305 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PROX1Q92786 737 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 MYOCQ99972 504 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 NANOGQ9H9S0 305 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 AIG1Q9NVV5 245 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
PCDHB9-201ENST00000316105 H3BN98 237 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 GSTM1P09488 218 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC35G4P0C7Q5 338 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 PPIBP23284 216 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 WASP42768 502 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ASMTP46597 345 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 GALNT15Q8N3T1 639 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 NOL6Q9H6R4 1146 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 NOBOXO60393 691 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 KRT75O95678 551 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 FESP07332 822 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms