RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRIM74Q86UV6 250 aa20.78■□□□□ 0.92
ATG4D-201ENST00000309469 FNDC5Q8NAU1 212 aa20.78■□□□□ 0.92
ATG4D-201ENST00000309469 ZCCHC2Q9C0B9 1178 aaKnown RBP20.78■□□□□ 0.92
ATG4D-201ENST00000309469 WDR47O94967 919 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 MTHFRP42898 656 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 THOP1P52888 689 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 BCL7AQ4VC05 210 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 AAGABQ6PD74 315 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 HACD2Q6Y1H2 254 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 RNF165Q6ZSG1 346 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 ADGRG6Q86SQ4 1221 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 JADE3Q92613 823 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 HBEGFQ99075 208 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 BRINP2Q9C0B6 783 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 RSPH9Q9H1X1 276 aaPredicted RBP20.77■□□□□ 0.92
ATG4D-201ENST00000309469 DOCK8Q8NF50 2099 aa20.77■□□□□ 0.92
ATG4D-201ENST00000309469 CCDC85CA6NKD9 419 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 PSIP1O75475 530 aaKnown RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CLDN9O95484 217 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 GCKP35557 465 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 PREPP48147 710 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 AP2B1P63010 937 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 PTCHD3Q3KNS1 767 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 PDCD4Q53EL6 469 aaKnown RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 HOMEZQ8IX15 550 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 LILRA3Q8N6C8 439 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF513Q8N8E2 541 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 PCYOX1LQ8NBM8 494 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ANKRD27Q96NW4 1050 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 C1orf50Q9BV19 199 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 OR2AG1Q9H205 316 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 TRIM39Q9HCM9 518 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CLDND1Q9NY35 253 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 NDUFAF1Q9Y375 327 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CCL27Q9Y4X3 112 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 FFAR3O14843 346 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 LSM1O15116 133 aaKnown RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 GPR42O15529 346 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ME2P23368 584 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 MAP4P27816 1152 aaKnown RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 DRD3P35462 400 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 TNFRSF4P43489 277 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 EMX2Q04743 252 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CAMK2GQ13555 558 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 NR6A1Q15406 480 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CST6Q15828 149 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 VPS26BQ4G0F5 336 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF658BQ4V348 819 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-201ENST00000309469 BLOC1S3Q6QNY0 202 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 MTSS1LQ765P7 747 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 FBXL8Q96CD0 374 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 SLC29A3Q9BZD2 475 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ACTR8Q9H981 624 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 S100A14Q9HCY8 104 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 KLQ9UEF7 1012 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CROTQ9UKG9 612 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 CEP290O15078 2479 aa20.76■□□□□ 0.91
ATG4D-201ENST00000309469 ARHGEF33A8MVX0 844 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 SLC28A1O00337 649 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 MID1O15344 667 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 RNASEH1O60930 286 aaKnown RBP20.75■□□□□ 0.91
ATG4D-201ENST00000309469 LILRB5O75023 590 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 ULK1O75385 1050 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 SLC22A3O75751 556 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 CAPN3P20807 821 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 PBLDP30039 288 aaPredicted RBP20.75■□□□□ 0.91
ATG4D-201ENST00000309469 C8orf82Q6P1X6 216 aaPredicted RBP20.75■□□□□ 0.91
ATG4D-201ENST00000309469 LAYNQ6UX15 382 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 RETREG3Q86VR2 466 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 SLC22A15Q8IZD6 547 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 TDHQ8IZJ6 230 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 AADATQ8N5Z0 425 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 SLC26A7Q8TE54 656 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 TSPEARQ8WU66 669 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 PYCR2Q96C36 320 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 ROPN1LQ96C74 230 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 SLC52A3Q9NQ40 469 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 HEBP1Q9NRV9 189 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 ADA2Q9NZK5 511 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 ATXN10Q9UBB4 475 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 ANGPTL2Q9UKU9 493 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 C5orf42Q9H799 3197 aa20.75■□□□□ 0.91
ATG4D-201ENST00000309469 KRT87PA6NCN2 255 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 C9JVG2 144 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 E7ENX8 843 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 K7EQS6 105 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 MANBAO00462 879 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 NPC1O15118 1278 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ANGPT2O15123 496 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 RGS14O43566 566 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ANPEPP15144 967 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 XRCC1P18887 633 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 MAPK9P45984 424 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 GTF2H3Q13889 308 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 AP5B1Q2VPB7 878 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 NEK5Q6P3R8 708 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 TRIM46Q7Z4K8 759 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 RNF148Q8N7C7 305 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms