RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PRSS55Q6UWB4 352 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ACSS3Q9H6R3 686 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 UPB1Q9UBR1 384 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PECAM1P16284 738 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CDKN2BP42772 138 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 RPL14P50914 215 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 OLR1P78380 273 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 LCN1P1Q5VSP4 162 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF730Q6ZMV8 503 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PLD5Q8N7P1 536 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TNKS2Q9H2K2 1166 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 KCNK4Q9NYG8 393 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 S100A6P06703 90 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF823P16415 610 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CRTC3Q6UUV7 619 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DEF8Q6ZN54 512 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MTDHQ86UE4 582 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SIAH1Q8IUQ4 282 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PIGKQ92643 395 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PTCD3Q96EY7 689 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 COMMD4Q9H0A8 199 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 IFT52Q9Y366 437 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SUV39H1O43463 412 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR32O75388 356 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 STBD1O95210 358 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ADSSP30520 456 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PKNOX1P55347 436 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MAPK11Q15759 364 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 FAM189A2Q15884 450 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TTC27Q6P3X3 843 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 FAM151BQ6UXP7 276 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ABHD13Q7L211 337 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SETD6Q8TBK2 473 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 EPS8L3Q8TE67 593 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ATXN2LQ8WWM7 1075 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TRAPPC9Q96Q05 1148 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF717Q9BY31 904 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 B3GNT5Q9BYG0 378 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ALG9Q9H6U8 611 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DHRS7Q9Y394 339 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GRIP1Q9Y3R0 1128 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 STK16O75716 305 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 RIPK1Q13546 671 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DUPD1Q68J44 220 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TCEAL8Q8IYN2 117 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ATP6V1C2Q8NEY4 427 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 OR7A2PQ8NGA2 310 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 FCRL5Q96RD9 977 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CHID1Q9BWS9 393 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DPEP2Q9H4A9 486 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PTPRHQ9HD43 1115 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CCNB1IP1Q9NPC3 277 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF222Q9UK12 451 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DMTF1Q9Y222 760 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SRRM3A6NNA2 597 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ARHGEF33A8MVX0 844 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 AP5Z1O43299 807 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 AP2A2O94973 939 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 PAPSS2O95340 614 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 RHOP08100 348 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 CLCN7P51798 805 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ELOCQ15369 112 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MPP7Q5T2T1 576 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GCNT7Q6ZNI0 430 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 PNPLA2Q96AD5 504 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 LMLNQ96KR4 655 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 B3GALT6Q96L58 329 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 IFT46Q9NQC8 304 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GDF3Q9NR23 364 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 GKN1Q9NS71 199 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 DDX18Q9NVP1 670 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 NCDNQ9UBB6 729 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 RFXANKO14593 260 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OR7A10O76100 309 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF432O94892 652 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 DBIP07108 87 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OC90Q02509 493 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 KIAA1161Q6NSJ0 714 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 RANBP3LQ86VV4 465 aaPredicted RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OR6C4Q8NGE1 309 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TMEM125Q96AQ2 219 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 LDAHQ9H6V9 325 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 OGDHLQ9ULD0 1010 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHGB1Q9Y5G3 927 aa8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 TNS1Q9HBL0 1735 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 MSI1O43347 362 aaKnown RBP8.19□□□□□ -1.1
PCDHB1-201ENST00000306549 PEX14O75381 377 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms