RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OR4D2P58180 307 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PMS2P3Q13401 168 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PTGR1Q14914 329 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ZNF614Q8N883 585 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 IGSF5Q9NSI5 407 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PHF24Q9UPV7 400 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 SLC22A1O15245 554 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 SGTAO43765 313 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 XPNPEP2O43895 674 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 UGT2B4P06133 528 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ALPIP09923 528 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PRPS2P11908 318 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PPIBP23284 216 aaKnown RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 CDH12P55289 794 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 NAE1Q13564 534 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 DNASE1L3Q13609 305 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 USP39Q53GS9 565 aaKnown RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 BLOC1S3Q6QNY0 202 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PIH1D2Q8WWB5 315 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 MTERF1Q99551 399 aaKnown RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 ACAT2Q9BWD1 397 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ANKRD60Q9BZ19 345 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 GPC6Q9Y625 555 aaPredicted RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 GMEB1Q9Y692 573 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 KPNA5O15131 536 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 TNFRSF21O75509 655 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ANXA4P09525 319 aaPredicted RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 ARSAP15289 507 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ANXA8L1Q5VT79 327 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ERAP2Q6P179 960 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 RANBP10Q6VN20 620 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SYVN1Q86TM6 617 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 FUBP3Q96I24 572 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX54-201ENST00000306014 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GKN1Q9NS71 199 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SPG21Q9NZD8 308 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 PRSS51A0A1B0GVH4 220 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ARVCFO00192 962 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 OR1I1O60431 355 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 NFKB2Q00653 900 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 OR4D1Q15615 310 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 DEF8Q6ZN54 512 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GOLGA7Q7Z5G4 137 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CSGALNACT1Q8TDX6 532 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 PPCDCQ96CD2 204 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 AURKBQ96GD4 344 aaPredicted RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 BIRC8Q96P09 236 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CCDC182A6NF36 153 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 DFNA5O60443 496 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 SLC5A2P31639 672 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 PKDCCQ504Y2 493 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CCDC80Q76M96 950 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CACUL1Q86Y37 369 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ZNF597Q96LX8 424 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 MAGEE1Q9HCI5 957 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CD84Q9UIB8 345 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 MAPRE3Q9UPY8 281 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GSTK1Q9Y2Q3 226 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 A0A0D9SEW6 157 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SAGE2PA6NJ88 616 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GPR32O75388 356 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CREG1O75629 220 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
DDX54-201ENST00000306014 HACD2Q6Y1H2 254 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 PLEKHM3Q6ZWE6 761 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 LYSMD3Q7Z3D4 306 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 TMPRSS11BQ86T26 416 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 Q96MT0 163 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
DDX54-201ENST00000306014 C7orf72A4D263 438 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 OR2AG2A6NM03 316 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 PPP6CO00743 305 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 PER2O15055 1255 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 IST1P53990 364 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 VBP1P61758 197 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 EMX2Q04743 252 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 MYBPC3Q14896 1274 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 TRIM63Q969Q1 353 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 BBS4Q96RK4 519 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 CMTM6Q9NX76 183 aa13.03□□□□□ -0.32
DDX54-201ENST00000306014 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms