RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 KCNK13Q9HB14 408 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 WDR6Q9NNW5 1121 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 KCTD5Q9NXV2 234 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 NDRG2Q9UN36 371 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 SPO11Q9Y5K1 396 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 MIA3Q5JRA6 1907 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 NPHS1O60500 1241 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ATG13O75143 517 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TFPTP0C1Z6 253 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CCDC159P0C7I6 412 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CHRM1P11229 460 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 TYRP14679 529 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PPP2R1BP30154 601 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KIR3DL1P43629 444 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 APLP1P51693 650 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 NUDT6P53370 316 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SH3BP2P78314 561 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KLHL12Q53G59 568 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SPANXN4Q5MJ08 99 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 LDLRAD1Q5T700 205 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AAGABQ6PD74 315 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CAMKK1Q8N5S9 505 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PTERQ96BW5 349 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 LRCH3Q96II8 777 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 WDR83Q9BRX9 315 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 KIFC1Q9BW19 673 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MFSD1Q9H3U5 465 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PRDM16Q9HAZ2 1276 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CREBZFQ9NS37 354 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PNPLA3Q9NST1 481 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CDV3Q9UKY7 258 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 DYTNA2CJ06 578 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM25AB3EWG3 89 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM25CB3EWG5 89 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM25GB3EWG6 89 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLC35G4P0C7Q5 338 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 C8orf89P0DMQ9 161 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CTSEP14091 401 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 IGFBP5P24593 272 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 HNF1BP35680 557 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CTSOP43234 321 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 MAPKAPK2P49137 400 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CCR3P51677 355 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 IST1P53990 364 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CDH12P55289 794 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SULT2A1Q06520 285 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 HYAL2Q12891 473 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TGFBIQ15582 683 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM43BQ6ZT52 329 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 TMEM173Q86WV6 379 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 OR4K1Q8NGD4 311 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 USP7Q93009 1102 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ZCCHC2Q9C0B9 1178 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 VRTNQ9H8Y1 702 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 DNAJC11Q9NVH1 559 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 INTS7Q9NVH2 962 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 FETUBQ9UGM5 382 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 EMCNQ9ULC0 261 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ZNF451Q9Y4E5 1061 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 F5P12259 2224 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ABLIM1O14639 778 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FGBP02675 491 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KLK1P06870 262 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AOC1P19801 751 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SSR2P43308 183 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 RPS9P46781 194 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SGSHP51688 502 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 NUP107P57740 925 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 Q6ZVL8 140 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TRPV1Q8NER1 839 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PTCD2Q8WV60 388 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLC9A6Q92581 669 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 OSBPL6Q9BZF3 934 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 HDHD2Q9H0R4 259 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 VPS51Q9UID3 782 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ENTPD4Q9Y227 616 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 DOCK1Q14185 1865 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLC35F4A4IF30 521 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 G3V2L1 256 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CXCR6O00574 342 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TNFRSF10BO14763 440 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 BCKDKO14874 412 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TFECO14948 347 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SUV39H1O43463 412 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SMAD6O43541 496 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM189A1O60320 539 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FGF18O76093 207 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLC6A4P31645 630 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GHRHRQ02643 423 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CYP2A13Q16696 494 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GSTA3Q16772 222 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 LY6G5CQ5SRR4 150 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SPATA19Q7Z5L4 167 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CYP4Z1Q86W10 505 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 OR8D1Q8WZ84 308 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 RAD51AP1Q96B01 352 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 LMLNQ96KR4 655 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 HOPXQ9BPY8 73 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 CCDC28BQ9BUN5 200 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms