RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 NANOGQ9H9S0 305 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ANTXRLA6NF34 631 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 KPNA3O00505 521 aaPredicted RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 ANKRD28O15084 1053 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 STAMBPO95630 424 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ZNF30P17039 623 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 PSMC3P17980 439 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 MRPL19P49406 292 aaKnown RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 CDKL1Q00532 357 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 GK3PQ14409 553 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 COQ5Q5HYK3 327 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 RNF220Q5VTB9 566 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ADCY4Q8NFM4 1077 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 CLHC1Q8NHS4 586 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 UBTD2Q8WUN7 234 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ASB11Q8WXH4 323 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 SMG7Q92540 1137 aaKnown RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 PPM1MQ96MI6 270 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 NTMT1Q9BV86 223 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 PARVBQ9HBI1 364 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ZDHHC4Q9NPG8 344 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 COQ6Q9Y2Z9 468 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 A0A1W2PQ67 120 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 EME2A4GXA9 379 aaPredicted RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 PRRT4C9JH25 899 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 PLK4O00444 970 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 INPP4BO15327 924 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 TPST1O60507 370 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 TULP3O75386 442 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 SEC22BO75396 215 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 CA3P07451 260 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 HSD17B1P14061 328 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 MSH3P20585 1137 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ITPKAP23677 461 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 SLC7A1P30825 629 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 GSK3BP49841 420 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 LIPEQ05469 1076 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 PDK3Q15120 406 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 ZNF805Q5CZA5 627 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 C6orf52Q5T4I8 152 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 RALGPS2Q86X27 583 aaPredicted RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 ZNF557Q8N988 423 aaPredicted RBP18.85■□□□□ 0.61
BRAF-201ENST00000288602 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 TSPEARQ8WU66 669 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 SLC12A9Q9BXP2 914 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 TRIM54Q9BYV2 358 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 SLC32A1Q9H598 525 aa18.85■□□□□ 0.61
BRAF-201ENST00000288602 MANBAO00462 879 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 ARPC2O15144 300 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 RGS14O43566 566 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 WDR47O94967 919 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 HIST1H2AGP0C0S8 130 aaPredicted RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 EBLN1P0CF75 366 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 HIST1H2ADP20671 130 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 OXTRP30559 389 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 IMPG1Q17R60 797 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 PTCHD3Q3KNS1 767 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 HENMT1Q5T8I9 393 aaKnown RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 NAIF1Q69YI7 327 aaPredicted RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 PARS2Q7L3T8 475 aaKnown RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 PLPP6Q8IY26 295 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 CELF5Q8N6W0 485 aaKnown RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 OTUB2Q96DC9 234 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 HIST1H2AHQ96KK5 128 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 HIST1H2AJQ99878 128 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 H2AFJQ9BTM1 129 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 COQ10BQ9H8M1 238 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 FBXO10Q9UK96 956 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 SLC8A2Q9UPR5 921 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 SLC22A14Q9Y267 594 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 SPTBN5Q9NRC6 3674 aaKnown RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 ZNF197O14709 1029 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 AKAP10O43572 662 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 CLDN9O95484 217 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 CTSCP53634 463 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 UBE3AQ05086 875 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 ABRQ12979 859 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 SELPLGQ14242 412 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 GBX1Q14549 363 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 ACOX1Q15067 660 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 NEK5Q6P3R8 708 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 LIX1Q8N485 282 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 KRTCAP2Q8N6L1 136 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 PPP3R2Q96LZ3 170 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 CIB1Q99828 191 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 SLC2A11Q9BYW1 496 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 AP4B1Q9Y6B7 739 aa18.84■□□□□ 0.61
BRAF-201ENST00000288602 ZFC3H1O60293 1989 aaKnown RBP18.84■□□□□ 0.61
BRAF-201ENST00000288602 FAM149AA5PLN7 773 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 NUAK1O60285 661 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 PDYNP01213 254 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 MTPNP58546 118 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 RNF175Q8N4F7 328 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 PHOSPHO2Q8TCD6 241 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 CNBD2Q96M20 576 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 BTBD9Q96Q07 612 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 KCTD14Q9BQ13 255 aaPredicted RBP18.83■□□□□ 0.61
BRAF-201ENST00000288602 UBAP1Q9NZ09 502 aa18.83■□□□□ 0.61
BRAF-201ENST00000288602 SLC9A3R1O14745 358 aaPredicted RBP18.83■□□□□ 0.6
BRAF-201ENST00000288602 ELFN1P0C7U0 828 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms