RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RPS6KA6Q9UK32 745 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 A0A0U1RQF3 1178 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF487B1APH4 448 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GRID2O43424 1007 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 RPLP2P05387 115 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 OR56A5P0C7T3 313 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 CDKN2DP55273 166 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 RHDQ02161 417 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SUZ12Q15022 739 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 FUT10Q6P4F1 479 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 KLHL35Q6PF15 583 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PTCHD4Q6ZW05 846 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 RAB42Q8N4Z0 105 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GALNT6Q8NCL4 622 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 EEF1AKMT1Q8WVE0 214 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ASB12Q8WXK4 309 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SMOC2Q9H3U7 446 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 EXD2Q9NVH0 621 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PDP1Q9P0J1 537 aaPredicted RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GNPTGQ9UJJ9 305 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC25A13Q9UJS0 675 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 A0A0G2JPF8 293 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 HNRNPCL3B7ZW38 293 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 RFXANKO14593 260 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ARPC2O15144 300 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PGRMC2O15173 223 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 CLDN11O75508 207 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 C9P02748 559 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 HNRNPCL4P0DMR1 293 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 KCNA5P22460 613 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GATMP50440 423 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 CASP9P55211 416 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PRKCZQ05513 592 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 LSAMPQ13449 338 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 HM13Q8TCT9 377 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 MLXQ9UH92 298 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 MAGEL2Q9UJ55 1249 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PSME2Q9UL46 239 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SDK1Q7Z5N4 2213 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PPP6CO00743 305 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 HOXA2O43364 376 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 OR1I1O60431 355 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 RSL1D1O76021 490 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PABPC4LP0CB38 370 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 FOSL2P15408 326 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GSK3BP49841 420 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 MYBPC3Q14896 1274 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 UPP1Q16831 310 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 LIN54Q6MZP7 749 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 TXNDC11Q6PKC3 985 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GPR180Q86V85 440 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 GALNT12Q8IXK2 581 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 AADATQ8N5Z0 425 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 ZW10O43264 779 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 OR10H3O60404 316 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 LAPTM5Q13571 262 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 HERC3Q15034 1050 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 MIR1-1HGQ9H1L0 117 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 VPS51Q9UID3 782 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 MAP1BP46821 2468 aaKnown RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 ZSCAN5BA6NJL1 495 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 OR6C75A6NL08 312 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 BMP10O95393 424 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 UROSP10746 265 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 CYP2A7P20853 494 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 HNF4AP41235 474 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 CRHR2Q13324 411 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 GK3PQ14409 553 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 LSM14AQ8ND56 463 aaKnown RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 FNDC8Q8TC99 324 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 AP3S1Q92572 193 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 MYO19Q96H55 970 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 ACAT2Q9BWD1 397 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 CHURC1-FNTBB4DL54 471 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 K7EPI3 171 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 KDM4BO94953 1096 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 RLN1P04808 185 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 PRKAG1P54619 331 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 SPIBQ01892 262 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms