RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 BFARQ9NZS9 450 aa14.01□□□□□ -0.17
HMGN3-201ENST00000275036 POMT2Q9UKY4 750 aa14.01□□□□□ -0.17
HMGN3-201ENST00000275036 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
HMGN3-201ENST00000275036 CCDC88CQ9P219 2028 aa14.01□□□□□ -0.17
HMGN3-201ENST00000275036 PCM1Q15154 2024 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ZNF891A8MT65 544 aaPredicted RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 PGRMC1O00264 195 aaKnown RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 ZNF185O15231 689 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ZSCAN12O43309 604 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 CSE1LP55060 971 aaKnown RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 TUBB3Q13509 450 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
HMGN3-201ENST00000275036 PWWP2BQ6NUJ5 590 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ARMC6Q6NXE6 501 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ZNF449Q6P9G9 518 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 C6orf15Q6UXA7 325 aaPredicted RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 CAND1Q86VP6 1230 aaKnown RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 PPP1R3BQ86XI6 285 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 KMT5CQ86Y97 462 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ADGRF3Q8IZF5 1079 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 KRT222Q8N1A0 295 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ESX1Q8N693 406 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ACTRT1Q8TDG2 376 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 STARD8Q92502 1023 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 PDLIM2Q96JY6 352 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 RUFY1Q96T51 708 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 TTC1Q99614 292 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 P2RY12Q9H244 342 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 MRM3Q9HC36 420 aaKnown RBP14□□□□□ -0.17
HMGN3-201ENST00000275036 CROTQ9UKG9 612 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 SOX13Q9UN79 622 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ICKQ9UPZ9 632 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 ASF1AQ9Y294 204 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 RPS6KL1Q9Y6S9 549 aa14□□□□□ -0.17
HMGN3-201ENST00000275036 GSAPA4D1B5 854 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 SLC9B1P1A6NJY1 282 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 GOLGA8KD6RF30 607 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 AP3B1O00203 1094 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-201ENST00000275036 GPC4O75487 556 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-201ENST00000275036 FURINP09958 794 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
HMGN3-201ENST00000275036 HSD11B2P80365 405 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PRKAA1Q13131 559 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 GPR19Q15760 415 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 SYTL3Q4VX76 610 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 BORAQ6PGQ7 559 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 AMIGO1Q86WK6 493 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 KIAA1143Q96AT1 154 aaPredicted RBP13.99□□□□□ -0.17
HMGN3-201ENST00000275036 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PDE7BQ9NP56 450 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 FGF21Q9NSA1 209 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 ANAPC5Q9UJX4 755 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PLAGL1Q9UM63 463 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
HMGN3-201ENST00000275036 PHF2O75151 1096 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 VAPBO95292 243 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 PVRP15151 417 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 ST6GAL1P15907 406 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 CDH3P22223 829 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 AOAHP28039 575 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 DLSTP36957 453 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 TTPAP49638 278 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 ARL4DP49703 201 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 POLE2P56282 527 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 ACY1Q03154 408 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
HMGN3-201ENST00000275036 CTSL3PQ5NE16 218 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 PRAMEF17Q5VTA0 474 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 TMEM135Q86UB9 458 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 TBC1D21Q8IYX1 336 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 SLC22A15Q8IZD6 547 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 CARFQ8N187 725 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.17
HMGN3-201ENST00000275036 OR5K2Q8NHB8 316 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 ZNF501Q96CX3 271 aaPredicted RBP13.98□□□□□ -0.17
HMGN3-201ENST00000275036 NAP1L3Q99457 506 aaPredicted RBP13.98□□□□□ -0.17
HMGN3-201ENST00000275036 PITPNM3Q9BZ71 974 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 TWSG1Q9GZX9 223 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 C1GALT1Q9NS00 363 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 GEMIN8Q9NWZ8 242 aaKnown RBP13.98□□□□□ -0.17
HMGN3-201ENST00000275036 IL1RAPL1Q9NZN1 696 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 MED13Q9UHV7 2174 aa13.98□□□□□ -0.17
HMGN3-201ENST00000275036 ANKRD12Q6UB98 2062 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 GOLGA8MH3BSY2 632 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 J3QKU1 62 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 MATN2O00339 956 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 SLC28A2O43868 658 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 KIF5CO60282 957 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 NTRK1P04629 796 aa13.97□□□□□ -0.17
HMGN3-201ENST00000275036 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms