RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 VILLO15195 856 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 S100A5P33763 92 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 TTKP33981 857 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 CRATP43155 626 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 SLCO6A1Q86UG4 719 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 DACT3Q96B18 629 aaPredicted RBP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 RECQL5O94762 991 aaPredicted RBP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 CYP11A1P05108 521 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 DGKEP52429 567 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 PRKAG1P54619 331 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 LARP4Q71RC2 724 aaKnown RBP eCLIP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 TRIM48Q8IWZ4 208 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 FAM9CQ8IZT9 166 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 LZICQ8WZA0 190 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 DEC1Q9P2X7 70 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 FAM234BA2RU67 622 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 LCHNA4D1U4 455 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 LDB2O43679 373 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 STC2O76061 302 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 RAVER1Q8IY67 606 aaKnown RBP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 KRTCAP2Q8N6L1 136 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 TMEM102Q8N9M5 508 aaPredicted RBP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 KCNN1Q92952 543 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 GPR78Q96P69 363 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 MTERF1Q99551 399 aaKnown RBP19.46■□□□□ 0.71
CSPG5-201ENST00000264723 KCTD5Q9NXV2 234 aa19.46■□□□□ 0.71
CSPG5-201ENST00000264723 ADAMTS4O75173 837 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 GPX3P22352 226 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 ZNF33AQ06730 810 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 SEMA3AQ14563 771 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 FGD3Q5JSP0 725 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 TPGS2Q68CL5 300 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 GET4Q7L5D6 327 aaPredicted RBP19.46■□□□□ 0.7
CSPG5-201ENST00000264723 CCDC103Q8IW40 242 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 REEP1Q9H902 201 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 SCHIP1Q9P0W5 487 aaPredicted RBP19.46■□□□□ 0.7
CSPG5-201ENST00000264723 RNF11Q9Y3C5 154 aa19.46■□□□□ 0.7
CSPG5-201ENST00000264723 SHROOM3Q8TF72 1996 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 CXCR6O00574 342 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 MUSKO15146 869 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 RGRP47804 291 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ACADVLP49748 655 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 RAB41Q5JT25 222 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 CROCCP3Q8IVE0 287 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 KIAA2013Q8IYS2 634 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 HM13Q8TCT9 377 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 POP4O95707 220 aaKnown RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ZNF26P17031 533 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 SEPHS1P49903 392 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 PPP4R4Q6NUP7 873 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 NSMCE3Q96MG7 304 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 PSKH2Q96QS6 385 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 YIPF2Q9BWQ6 316 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 EPB41L1Q9H4G0 881 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 DNAAF2Q9NVR5 837 aaKnown RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 PDE10AQ9Y233 779 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 KCNE2Q9Y6J6 123 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 LOC730098B7Z3J9 87 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 XPNPEP2O43895 674 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 EPN2O95208 641 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ILF2Q12905 390 aaKnown RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 PMS2P3Q13401 168 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 DAG1Q14118 895 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 RAB39AQ14964 217 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 FUNDC1Q8IVP5 155 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ZC3H7AQ8IWR0 971 aaKnown RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 BBS7Q8IWZ6 715 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ARL10Q8N8L6 244 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ASZ1Q8WWH4 475 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 ITCHQ96J02 903 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 INTS10Q9NVR2 710 aaKnown RBP19.45■□□□□ 0.7
CSPG5-201ENST00000264723 AASSQ9UDR5 926 aa19.45■□□□□ 0.7
CSPG5-201ENST00000264723 NUP214P35658 2090 aaPredicted RBP19.44■□□□□ 0.7
CSPG5-201ENST00000264723 HHLA1C9JL84 531 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 ANGPTL1O95841 491 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 BLOC1S3Q6QNY0 202 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 TMPRSS11BQ86T26 416 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 FAM124AQ86V42 546 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 CFAP206Q8IYR0 622 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 STX19Q8N4C7 294 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 ZNF614Q8N883 585 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 CXorf40AQ8TE69 158 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 RTP3Q9BQQ7 232 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 TOR3AQ9H497 397 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 PDP1Q9P0J1 537 aaPredicted RBP19.44■□□□□ 0.7
CSPG5-201ENST00000264723 CLTBP09497 229 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 ST13P50502 369 aaKnown RBP19.44■□□□□ 0.7
CSPG5-201ENST00000264723 GTDC1Q4AE62 458 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 GOLGA7Q7Z5G4 137 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 TBC1D19Q8N5T2 526 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 BORCS5Q969J3 196 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 ZNF599Q96NL3 588 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 NAA50Q9GZZ1 169 aaKnown RBP19.44■□□□□ 0.7
CSPG5-201ENST00000264723 TPRKBQ9Y3C4 175 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 SMIM18P0DKX4 95 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 CDK4P11802 303 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 POU2F1P14859 743 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 AHSA2Q719I0 299 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 NODALQ96S42 347 aa19.44■□□□□ 0.7
CSPG5-201ENST00000264723 SUV39H2Q9H5I1 410 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms