RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SCELO95171 688 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 CSF2P04141 144 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 GIMD1P0DJR0 217 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 DNASE1L1P49184 302 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 MAPK12P53778 367 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 MTA1Q13330 715 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 TOP6BLQ8N6T0 577 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
SMG6-201ENST00000263073 SLC6A15Q9H2J7 730 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 PDZD7Q9H5P4 517 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 ASAH2Q9NR71 780 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 MROH1Q8NDA8 1641 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 OR1F1O43749 312 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 MATN4O95460 622 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 PRH1P02810 166 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 SLC7A1P30825 629 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 CACNG1Q06432 222 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 CRY2Q49AN0 593 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 TPRG1LQ5T0D9 272 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 BEND5Q7L4P6 421 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 OR5K1Q8NHB7 308 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 ASB12Q8WXK4 309 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
SMG6-201ENST00000263073 NUDT4Q9NZJ9 180 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 DNAJB9Q9UBS3 223 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 OR14I1A6ND48 311 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CH25HO95992 272 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 PLA2G16P53816 162 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CDKL1Q00532 357 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ZNF234Q14588 700 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 TGFBIQ15582 683 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CHERPQ8IWX8 916 aaKnown RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 STYXQ8WUJ0 223 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SEC14L1Q92503 715 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CKLFQ9UBR5 152 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 VNN1O95497 513 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 ZNF182P17025 639 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 STT3AP46977 705 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 PGGT1BP53609 377 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ZNF627Q7L945 461 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 TMEM192Q8IY95 271 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CENPSQ8N2Z9 138 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 TLL2Q9Y6L7 1015 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 NARSO43776 548 aaKnown RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 SERPINA3P01011 423 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CYP11A1P05108 521 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 DAG1Q14118 895 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ODF4Q2M2E3 257 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 KLHL35Q6PF15 583 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CCDC120Q96HB5 630 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 LMLNQ96KR4 655 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SMURF2Q9HAU4 748 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 LAMP2P13473 410 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ATF6P18850 670 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SP140Q13342 867 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 HERC3Q15034 1050 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 BPIFB1Q8TDL5 484 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SKA1Q96BD8 255 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ERMAPQ96PL5 475 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 HERC2P3Q9BVR0 1158 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 MRPL9Q9BYD2 267 aaKnown RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 AKAP7Q9P0M2 348 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 YARS2Q9Y2Z4 477 aaKnown RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 NPHS1O60500 1241 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CDK14O94921 469 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 SPAM1P38567 509 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 UFM1P61960 85 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 CYP2U1Q7Z449 544 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 OR10H5Q8NGA6 315 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 DPF3Q92784 378 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 C5orf34Q96MH7 638 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 IFT27Q9BW83 186 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 MOV10Q9HCE1 1003 aaKnown RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
SMG6-201ENST00000263073 PTCH2Q9Y6C5 1203 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 MAU2Q9Y6X3 613 aa11.86□□□□□ -0.51
SMG6-201ENST00000263073 ADAMDEC1O15204 470 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 B4GALT4O60513 344 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 XYLBO75191 536 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 NDST3O95803 873 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 UNGP13051 313 aaPredicted RBP11.85□□□□□ -0.51
SMG6-201ENST00000263073 TACR2P21452 398 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 PTPN9P43378 593 aa11.85□□□□□ -0.51
SMG6-201ENST00000263073 RPS14P62263 151 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms