RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 LETMD1Q6P1Q0 360 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TERB1Q8NA31 727 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 NPLOC4Q8TAT6 608 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 EGLN2Q96KS0 407 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 BOCQ9BWV1 1114 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PADI4Q9UM07 663 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ZNF510Q9Y2H8 683 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SPO11Q9Y5K1 396 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SLC7A4O43246 635 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 BMP10O95393 424 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SNAI1O95863 264 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 CKMT1AP12532 417 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ZNF7P17097 686 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 TNNI3P19429 210 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 MAGEA6P43360 314 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TUBA4AP68366 448 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PCBP2Q15366 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
PALB2-201ENST00000261584 PKDCCQ504Y2 493 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 BLOC1S3Q6QNY0 202 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 RRM2BQ7LG56 351 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 OR9Q1Q8NGQ5 310 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 WDR36Q8NI36 951 aaKnown RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 NELL1Q92832 810 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ARMC5Q96C12 935 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 RBM4BQ9BQ04 359 aaKnown RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 RBM4Q9BWF3 364 aaKnown RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 TUBB1Q9H4B7 451 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 RNF167Q9H6Y7 350 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 A0A096LPI6 279 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PFKLP17858 780 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 C21orf33P30042 268 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 IDUAP35475 653 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SOX6P35712 828 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 RECQLP46063 649 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 PTPN5P54829 565 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 CYBRD1Q53TN4 286 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PIK3R6Q5UE93 754 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ZNF57Q68EA5 555 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 RGMBQ6NW40 437 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PRSS55Q6UWB4 352 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 AMER2Q8N7J2 671 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TMEM125Q96AQ2 219 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TCF25Q9BQ70 676 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ZBTB20Q9HC78 741 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 FAM118AQ9NWS6 357 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SLC9A8Q9Y2E8 581 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 SHROOM3Q8TF72 1996 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TCRBV3S1A0A5B6 114 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 PIPSLA2A3N6 862 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 IFRD1O00458 451 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 OTCP00480 354 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 PGRP06401 933 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 MYF6P23409 242 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 HTR1BP28222 390 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ZNF157P51786 506 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 MLLT6P55198 1093 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 ERVPABLB-1P60509 514 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 XKR6Q5GH73 641 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 KLHL17Q6TDP4 642 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 KIAA0408Q6ZU52 694 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SCML4Q8N228 414 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ZNF366Q8N895 744 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SETD9Q8NE22 299 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 OR13J1Q8NGT2 312 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 COPS8Q99627 209 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 AGPAT4Q9NRZ5 378 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TAS2R16Q9NYV7 291 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 COL14A1Q05707 1796 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 HTR3EA5X5Y0 456 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ARHGEF9O43307 516 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 PLOD3O60568 738 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CAPN15O75808 1086 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 NDST3O95803 873 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 BMP2P12643 396 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 APOFQ13790 326 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 PDZK1Q5T2W1 519 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 OTUD1Q5VV17 481 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 DENND5AQ6IQ26 1287 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TXNDC11Q6PKC3 985 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 RANBP10Q6VN20 620 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SERPINA9Q86WD7 417 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 PROSER1Q86XN7 944 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 MEX3DQ86XN8 651 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 ZNF280BQ86YH2 543 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SPARTQ8N0X7 666 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ANKFN1Q8N957 763 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 INPP5KQ9BT40 448 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TRIM62Q9BVG3 475 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ADARB2Q9NS39 739 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 ARFGEF1Q9Y6D6 1849 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CENPXA8MT69 81 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 K7ERQ8 282 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CXCL11O14625 94 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 PRMT5O14744 637 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 FPGTO14772 594 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TBL1XO60907 577 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms