RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 OR4Q2P0C623 313 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 PTPN9P43378 593 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 CHRNA4P43681 627 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 UBE2R2Q712K3 238 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC15A4Q8N697 577 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 TOP6BLQ8N6T0 577 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 XAGE5Q8WWM1 108 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 POP5Q969H6 163 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 OXSMQ9NWU1 459 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRAV6A0A075B6T7 132 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 H7C2Y5 167 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADAMDEC1O15204 470 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 XYLBO75191 536 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDH4P55283 916 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 AP3S2P59780 193 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SETMARQ53H47 684 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMARCD3Q6STE5 483 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC15A3Q8IY34 581 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SYNPOQ8N3V7 929 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 CMASQ8NFW8 434 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC13A3Q8WWT9 602 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 LRRC3Q9BY71 257 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 BRD9Q9H8M2 597 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 CTPS2Q9NRF8 586 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 DNMT3LQ9UJW3 386 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 IKZF2Q9UKS7 526 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 YARS2Q9Y2Z4 477 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF541Q9H0D2 1346 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC22A2O15244 555 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 TYROBPO43914 113 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 HIST1H2ABP04908 130 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 GPD2P43304 727 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 AIF1P55008 147 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 FCGRTP55899 365 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 NAE1Q13564 534 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 IQCCQ4KMZ1 466 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 HIST3H2AQ7L7L0 130 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 HIST1H2ACQ93077 130 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 MUS81Q96NY9 551 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 AKTIPQ9H8T0 292 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMEM9Q9P0T7 183 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 MKLN1Q9UL63 735 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 RNF6Q9Y252 685 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 A0A088AWK7 358 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 ISM1B1AKI9 464 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 E9PAM4 449 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRMT5O14744 637 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 DYRK3O43781 588 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 MPZL2O60487 215 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 GADD45GO95257 159 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SNAP29O95721 258 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLATP00750 562 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRKACAP17612 351 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 S100A2P29034 98 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 CSTF2P33240 577 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 NR4A2P43354 598 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 FNTBP49356 437 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SNRPD2P62316 118 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 GTF2H2Q13888 395 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 RBM20Q5T481 1227 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 RAB12Q6IQ22 244 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 GTF2H2CQ6P1K8 395 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 HAVCR1Q96D42 359 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 QRFPRQ96P65 431 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 NIFKQ9BYG3 293 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 PAK6Q9NQU5 681 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 RIMKLBQ9ULI2 386 aa9.59□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPEF2Q9C093 1822 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC35F4A4IF30 521 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 GOT2P00505 430 aaKnown RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 FCER2P06734 321 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 PKMP14618 531 aaKnown RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 CPN2P22792 545 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 STOMP27105 288 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 MBTD1Q05BQ5 628 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 GRB14Q14449 540 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAAH2Q6GMR7 532 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 EPGNQ6UW88 154 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 MOB2Q70IA6 237 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF420Q8TAQ5 688 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 TRPM4Q8TD43 1214 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 PMM1Q92871 262 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 CDC14AQ9UNH5 594 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 PTCH2Q9Y6C5 1203 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAM159BA6NKW6 160 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 PRH1P02810 166 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 EPHX2P34913 555 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 C2orf73Q8N5S3 287 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 GTPBP2Q9BX10 602 aaKnown RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR2B2Q9GZK3 357 aa9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC25A14O95258 325 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-201ENST00000260327 RELAQ04206 551 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms