RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 FOXN2P32314 431 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 NSG1P42857 185 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 SNX1Q13596 522 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 LAMB3Q13751 1172 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 UGT8Q16880 541 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 PLEKHS1Q5SXH7 462 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 CPZQ66K79 652 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 TRIM73Q86UV7 250 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 OR13J1Q8NGT2 312 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 TRAPPC9Q96Q05 1148 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 PITPNM3Q9BZ71 974 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 ACTR10Q9NZ32 417 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 ICKQ9UPZ9 632 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 DOPEY2Q9Y3R5 2298 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 CYSRT1A8MQ03 144 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 MEN1O00255 615 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 OR1I1O60431 355 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 KLK3P07288 261 aaPredicted RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 PSMA3P25788 255 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 CSE1LP55060 971 aaKnown RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 CDH17Q12864 832 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 KLRB1Q12918 225 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 SEMA5AQ13591 1074 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 OASLQ15646 514 aaKnown RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ZNF789Q5FWF6 425 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 SEL1L2Q5TEA6 688 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 TCTN3Q6NUS6 607 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 PPP1R21Q6ZMI0 780 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ZNF517Q6ZMY9 492 aaPredicted RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ASB18Q6ZVZ8 466 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 SYVN1Q86TM6 617 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 CPT1BQ92523 772 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 HDAC10Q969S8 669 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ZNF778Q96MU6 729 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 LATS2Q9NRM7 1088 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 IMPACTQ9P2X3 320 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 GUCA1BQ9UMX6 200 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ZNF148Q9UQR1 794 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ASF1AQ9Y294 204 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 TDRKHQ9Y2W6 561 aaKnown RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 SNRNP200O75643 2136 aaKnown RBP18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 LRRK2Q5S007 2527 aa18.42■□□□□ 0.54
TM6SF1-201ENST00000258909 ARGFXA6NJG6 315 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 C2orf74A8MZ97 194 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 E7EVH7 732 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 LIN7AO14910 233 aaPredicted RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 GOT2P00505 430 aaKnown RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 CYP2A7P20853 494 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 STIP1P31948 543 aaKnown RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 FOXK1P85037 733 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 ITIH4Q14624 930 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 PTCHD3Q3KNS1 767 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 UNC5AQ6ZN44 842 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 CDHR3Q6ZTQ4 885 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 APLFQ8IW19 511 aaPredicted RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 DSELQ8IZU8 1212 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 ENDOVQ8N8Q3 282 aaKnown RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 TEX19Q8NA77 164 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 GLIS1Q8NBF1 620 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 ACTR5Q9H9F9 607 aaPredicted RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 PCMTD2Q9NV79 361 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 PLAGL1Q9UM63 463 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 PRRC2CQ9Y520 2896 aaKnown RBP18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 MAST4O15021 2626 aa18.41■□□□□ 0.54
TM6SF1-201ENST00000258909 BHMG1C9JSJ3 638 aaPredicted RBP18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 GAS8O95995 478 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 FTH1P02794 183 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 GSTM1P09488 218 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 TPBGLP0DKB5 382 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 ACADLP28330 430 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 CDC25BP30305 580 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 RORAP35398 523 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 GSDMDP57764 484 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 GSTM4Q03013 218 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 SYTL3Q4VX76 610 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 TSTD2Q5T7W7 516 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 IZUMO3Q5VZ72 239 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 PACS1Q6VY07 963 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 SLC13A5Q86YT5 568 aaPredicted RBP18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 RNF10Q8N5U6 811 aaKnown RBP18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 LRFN5Q96NI6 719 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 FAM60AQ9NP50 221 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 RAB6BQ9NRW1 208 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 SPHK1Q9NYA1 384 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 SERTAD3Q9UJW9 196 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 PLAAQ9Y263 795 aa18.4■□□□□ 0.54
TM6SF1-201ENST00000258909 SLC5A10A0PJK1 596 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 HEATR9A2RTY3 570 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 ERI2A8K979 691 aaKnown RBP18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 MAP3K7O43318 606 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SUN1O94901 812 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 OR56A5P0C7T3 313 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 ZSCAN5DPP0CG00 497 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 UGT2B7P16662 529 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 FDFT1P37268 417 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 CCL11P51671 97 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 MLLT10P55197 1068 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SEMA3AQ14563 771 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 DEFB110Q30KQ9 67 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms