RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 YAF2Q8IY57 180 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 NXPE1Q8N323 547 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CBR4Q8N4T8 237 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 OR4K1Q8NGD4 311 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CCDC126Q96EE4 140 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 MRPL40Q9NQ50 206 aaKnown RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 IMP3Q9NV31 184 aaKnown RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 VTI1BQ9UEU0 232 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 KCNK6Q9Y257 313 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 ASF1AQ9Y294 204 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 LINC01553A4QN01 128 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 B4GAT1O43505 415 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CACNG3O60359 315 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CAPN15O75808 1086 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CTSLP07711 333 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 MAGEA12P43365 314 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 MTTPP55157 894 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 XIAPP98170 497 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 NFKB2Q00653 900 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 SPIDRQ14159 915 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 NFE2L1Q14494 772 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 STK32CQ86UX6 486 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 ZNF761Q86XN6 746 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 RAVER1Q8IY67 606 aaKnown RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 RGL4Q8IZJ4 473 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 PCYOX1LQ8NBM8 494 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 OR52E6Q96RD3 313 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 SLC25A23Q9BV35 468 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 ZBP1Q9H171 429 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 VCX3BQ9H321 246 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 OR51B5Q9H339 312 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 PRDM8Q9NQV8 689 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 MKS1Q9NXB0 559 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 DEC1Q9P2X7 70 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 GNPTGQ9UJJ9 305 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 CNOT6Q9ULM6 557 aaKnown RBP8.91□□□□□ -0.98
CKAP2-201ENST00000258607 DLGAP4Q9Y2H0 992 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 PCDHGA7Q9Y5G6 932 aa8.91□□□□□ -0.98
CKAP2-201ENST00000258607 WASH4PA8MWX3 477 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 MAGEC1O60732 1142 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 FUT4P22083 530 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 ADSLP30566 484 aaPredicted RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 BMPR1AP36894 532 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PTGER3P43115 390 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 POLR2JP52435 117 aaKnown RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PWP1Q13610 501 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 AARS2Q5JTZ9 985 aaKnown RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 OR4F3Q6IEY1 312 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 FAM86B1Q8N7N1 296 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 SPPL3Q8TCT6 385 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 FGF13Q92913 245 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 FAM162AQ96A26 154 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 MYRFLQ96LU7 910 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 RERGLQ9H628 205 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 CD93Q9NPY3 652 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 RAPGEFL1Q9UHV5 662 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PCM1Q15154 2024 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 C16orf96A6NNT2 1141 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 IFRD1O00458 451 aaPredicted RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PLOD2O00469 737 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 SLC16A8O95907 504 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 LMNAP02545 664 aaKnown RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.98
CKAP2-201ENST00000258607 COL6A2P12110 1019 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 DGKAP23743 735 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PSMB5P28074 263 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 SQLEQ14534 574 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 SHHQ15465 462 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 HKDC1Q2TB90 917 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 TMEM240Q5SV17 173 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 CATSPEREQ5SY80 951 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 CYP20A1Q6UW02 462 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 DGLUCYQ7Z3D6 616 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 SNX20Q7Z614 316 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 MMP21Q8N119 569 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 OR7A2PQ8NGA2 310 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 OR52J3Q8NH60 311 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 MAL2Q969L2 176 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 FBXL20Q96IG2 436 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 STK39Q9UEW8 545 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 ACSL6Q9UKU0 697 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 OAZ3Q9UMX2 235 aa8.9□□□□□ -0.98
CKAP2-201ENST00000258607 PTGES3LE9PB15 166 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 hCG_2039718K7EN88 272 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 KPNA5O15131 536 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 RECQL5O94762 991 aaPredicted RBP8.9□□□□□ -0.99
CKAP2-201ENST00000258607 TSPAN12O95859 305 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 ANXA5P08758 320 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 OR56A5P0C7T3 313 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 GDI1P31150 447 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 MASP1P48740 699 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 PRKAG1P54619 331 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 DBPQ10586 325 aaPredicted RBP8.9□□□□□ -0.99
CKAP2-201ENST00000258607 PDK3Q15120 406 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 TLR1Q15399 786 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 MAPKAPK3Q16644 382 aa8.9□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF423Q2M1K9 1284 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms