RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 VRK3Q8IV63 474 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 TBC1D21Q8IYX1 336 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 FBXO36Q8NEA4 188 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 OR52E1Q8NGJ3 308 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 OR5AR1Q8NGP9 310 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 CFAP61Q8NHU2 1237 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 RAB33BQ9H082 229 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 EPHA6Q9UF33 1036 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 POLG2Q9UHN1 485 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 LHX6Q9UPM6 363 aa18.18■□□□□ 0.5
UPK3B-201ENST00000257632 SLCO2B1O94956 709 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 RPN2P04844 631 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 ANKRD34CP0C6C1 535 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
UPK3B-201ENST00000257632 SEPHS1P49903 392 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 CAV1Q03135 178 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 ABRQ12979 859 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 DNTTIP2Q5QJE6 756 aaKnown RBP18.17■□□□□ 0.5
UPK3B-201ENST00000257632 ZBED8Q8IZ13 594 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 SNIP1Q8TAD8 396 aaKnown RBP18.17■□□□□ 0.5
UPK3B-201ENST00000257632 USP7Q93009 1102 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 TFB2MQ9H5Q4 396 aaKnown RBP18.17■□□□□ 0.5
UPK3B-201ENST00000257632 GRHL1Q9NZI5 618 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 CDYLQ9Y232 598 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 WDFY3Q8IZQ1 3526 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 APC2O95996 2303 aa18.17■□□□□ 0.5
UPK3B-201ENST00000257632 DMXL2Q8TDJ6 3036 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 GSAPA4D1B5 854 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CTAGE15A4D2H0 777 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CDRT15L2A8MXV6 281 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 E7ESA3 106 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 TOX3O15405 576 aaPredicted RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 RRP8O43159 456 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CTAGE8P0CG41 777 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 POLR2CP19387 275 aaPredicted RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 PLTPP55058 493 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 PPP1CAP62136 330 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 SLC7A5Q01650 507 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 FASTKD3Q14CZ7 662 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 STEAP4Q687X5 459 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CNSTQ6PJW8 725 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 LRRC69Q6ZNQ3 347 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CLEC14AQ86T13 490 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CTAGE6Q86UF2 777 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 AMIGO1Q86WK6 493 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CTAGE4Q8IX94 777 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 ZBTB2Q8N680 514 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 C2CD4AQ8NCU7 369 aaPredicted RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 ZNF248Q8NDW4 579 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 ART4Q93070 314 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 NAF1Q96HR8 494 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 FOPNLQ96NB1 174 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 CD180Q99467 661 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 WDR83Q9BRX9 315 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 LRRC1Q9BTT6 524 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 SAYSD1Q9NPB0 183 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 OCIAD1Q9NX40 245 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 SLC39A1Q9NY26 324 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 TSR3Q9UJK0 312 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 PCDHGA7Q9Y5G6 932 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 COMMD10Q9Y6G5 202 aa18.16■□□□□ 0.5
UPK3B-201ENST00000257632 DSPP15924 2871 aaKnown RBP18.16■□□□□ 0.5
UPK3B-201ENST00000257632 ATRXP46100 2492 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 B4E171 279 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 MATN2O00339 956 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 KIF1CO43896 1103 aaKnown RBP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 HAUS5O94927 633 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 FGF3P11487 239 aaPredicted RBP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 SLC5A2P31639 672 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 SHMT2P34897 504 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 TSPAN7P41732 249 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 ARL4DP49703 201 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 COL9A2Q14055 689 aaPredicted RBP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 TTLL9Q3SXZ7 439 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 TTC23LQ6PF05 361 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 UNC5DQ6UXZ4 953 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 KIAA0408Q6ZU52 694 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 PRSS42Q7Z5A4 293 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 PYROXD1Q8WU10 500 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 UBXN4Q92575 508 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 TAAR9Q96RI9 348 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 ZNF768Q9H5H4 540 aaKnown RBP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 XKR8Q9H6D3 395 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 WDR70Q9NW82 654 aa18.15■□□□□ 0.5
UPK3B-201ENST00000257632 URB1O60287 2271 aaKnown RBP18.15■□□□□ 0.5
UPK3B-201ENST00000257632 ANKRD11Q6UB99 2663 aaPredicted RBP18.14■□□□□ 0.49
UPK3B-201ENST00000257632 TLCD2A6NGC4 264 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 NVLO15381 856 aaKnown RBP18.14■□□□□ 0.49
UPK3B-201ENST00000257632 PRAMEF10O60809 474 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 VPS26AO75436 327 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 RAB15P59190 212 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 TRMT10BQ6PF06 316 aaKnown RBP18.14■□□□□ 0.49
UPK3B-201ENST00000257632 CAPN12Q6ZSI9 719 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 CCDC25Q86WR0 208 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 DCUN1D3Q8IWE4 304 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 CNTN4Q8IWV2 1026 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 PALM2Q8IXS6 379 aa18.14■□□□□ 0.49
UPK3B-201ENST00000257632 MMGT1Q8N4V1 131 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms