RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KLHDC8BQ8IXV7 354 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 EID3Q8N140 333 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ATG16L2Q8NAA4 619 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 UBE2FQ969M7 185 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ZNF583Q96ND8 569 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 DPH2Q9BQC3 489 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 RUBCNLQ9H714 662 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ELOVL2Q9NXB9 296 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 SH3PXD2BA1X283 911 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 AXIN1O15169 862 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 SEPT4O43236 478 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CAPN15O75808 1086 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 WISP3O95389 354 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 HOXB8P17481 243 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 S100A3P33764 101 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 PLA2G16P53816 162 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CD300CQ08708 224 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 COL9A2Q14055 689 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 DSC3Q14574 896 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 SMN1Q16637 294 aaKnown RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 TMEM236Q5W0B7 351 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CES5AQ6NT32 575 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 C10orf111Q8N326 155 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ACDQ96AP0 544 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 BARD1Q99728 777 aaKnown RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 ROGDIQ9GZN7 287 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ARIH1Q9Y4X5 557 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 TYW5A2RUC4 315 aaKnown RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 LSM1O15116 133 aaKnown RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 EPB42P16452 691 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 GNPDA1P46926 289 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
VHL-201ENST00000256474 CYP4F2P78329 520 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 PWP1Q13610 501 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 CHRNA6Q15825 494 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 TMEM179BQ7Z7N9 219 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ADAMTSL2Q86TH1 951 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 GPR150Q8NGU9 434 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 SLC22A17Q8WUG5 538 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 LINC01599Q8WXQ3 324 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 SCLYQ96I15 445 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 TRIB3Q96RU7 358 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 MIR1-1HGQ9H1L0 117 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ZFYVE1Q9HBF4 777 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 ZIM2Q9NZV7 527 aa13.24□□□□□ -0.29
VHL-201ENST00000256474 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.24□□□□□ -0.296e-11■□□□□ 9.6
VHL-201ENST00000256474 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 DRGXA6NNA5 263 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 EPOP01588 193 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 TACR1P25103 407 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 HTR1EP28566 365 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 TGFBR1P36897 503 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 CSKP41240 450 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 HLCSP50747 726 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 CDH4P55283 916 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 VBP1P61758 197 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ARF5P84085 180 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 DNASE1L3Q13609 305 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 SPCS2Q15005 226 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 CYP27C1Q4G0S4 372 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ADCK1Q86TW2 530 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 BORCS5Q969J3 196 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ZNF382Q96SR6 550 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 NUSAP1Q9BXS6 441 aaKnown RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 FAM118AQ9NWS6 357 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 VPS9D1Q9Y2B5 631 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 C16orf96A6NNT2 1141 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 COL6A1P12109 1028 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 PDCD4Q53EL6 469 aaKnown RBP13.23□□□□□ -0.29
VHL-201ENST00000256474 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 VTCN1Q7Z7D3 282 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 EID2BQ96D98 161 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 AMBRA1Q9C0C7 1298 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 DLGAP4Q9Y2H0 992 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 TSC2P49815 1807 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 STX16O14662 325 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 CLDN11O75508 207 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 ITGALP20701 1170 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 WEE1P30291 646 aa13.23□□□□□ -0.29
VHL-201ENST00000256474 PTGER3P43115 390 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms