RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 DYTNA2CJ06 578 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 PSMB9P28065 219 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 CCL23P55773 120 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 GRIK2Q13002 908 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 MTA1Q13330 715 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 CCDC97Q96F63 343 aaPredicted RBP18.09■□□□□ 0.49
LRP3-201ENST00000253193 SELENONQ9NZV5 590 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 PDE10AQ9Y233 779 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ZNF840PA6NDX5 716 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 SLC28A1O00337 649 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 DIRAS1O95057 198 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ITPKAP23677 461 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 CD300CQ08708 224 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 CERS6Q6ZMG9 384 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 HORMAD1Q86X24 394 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ATG16L2Q8NAA4 619 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 RMND5AQ9H871 391 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 WISP3O95389 354 aaPredicted RBP18.09■□□□□ 0.49
LRP3-201ENST00000253193 RPIAP49247 311 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 CHRNA6Q15825 494 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ZCCHC8Q6NZY4 707 aaKnown RBP18.09■□□□□ 0.49
LRP3-201ENST00000253193 CRTC3Q6UUV7 619 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ALDH16A1Q8IZ83 802 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 RGL4Q8IZJ4 473 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ARL14EPQ8N8R7 260 aaPredicted RBP18.09■□□□□ 0.49
LRP3-201ENST00000253193 FATE1Q969F0 183 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 BORCS5Q969J3 196 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ITCHQ96J02 903 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 ATG10Q9H0Y0 220 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 RAD21L1Q9H4I0 556 aa18.09■□□□□ 0.49
LRP3-201ENST00000253193 FAM155AB1AL88 458 aaPredicted RBP18.08■□□□□ 0.49
LRP3-201ENST00000253193 SHMT2P34897 504 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 PERM1Q5SV97 790 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 ANKRD34AQ69YU3 496 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 SLC22A15Q8IZD6 547 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 TMEM132CQ8N3T6 1108 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 GOLM1Q8NBJ4 401 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 SNX19Q92543 992 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 TANKQ92844 425 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 TPD52L3Q96J77 140 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 BRINP2Q9C0B6 783 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 DNAJB9Q9UBS3 223 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 PCDHGA11Q9Y5H2 935 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 CORINQ9Y5Q5 1042 aa18.08■□□□□ 0.49
LRP3-201ENST00000253193 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
LRP3-201ENST00000253193 KCNAB2Q13303 367 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 XKR7Q5GH72 579 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 TBC1D15Q8TC07 691 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 ZIC5Q96T25 663 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 ASPSCR1Q9BZE9 553 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 RNF38Q9H0F5 515 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 INIPQ9NRY2 104 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 RALGAPA2Q2PPJ7 1873 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 RFXANKO14593 260 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 TSPAN12O95859 305 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 NTRK1P04629 796 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 HLCSP50747 726 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 ARF5P84085 180 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 MBTPS1Q14703 1052 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 C2orf49Q9BVC5 232 aaPredicted RBP18.08■□□□□ 0.48
LRP3-201ENST00000253193 EBPLQ9BY08 206 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 IL17CQ9P0M4 197 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 VPS51Q9UID3 782 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 BRCA2P51587 3418 aa18.08■□□□□ 0.48
LRP3-201ENST00000253193 CFAP99D6REC4 459 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 LSM1O15116 133 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 WDR47O94967 919 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 TCF3P15923 654 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 TRIM16LQ309B1 348 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 ZNF773Q6PK81 442 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 LINC01599Q8WXQ3 324 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 UTS2RQ9UKP6 389 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 K7EPI3 171 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 GALTP07902 379 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 GALNT10Q86SR1 603 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 AADATQ8N5Z0 425 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 ARL10Q8N8L6 244 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 RASSF1Q9NS23 344 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 CD84Q9UIB8 345 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 RIMKLBQ9ULI2 386 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 PDCD11Q14690 1871 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 ZFC3H1O60293 1989 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 ZSWIM8A7E2V4 1837 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 NUP214P35658 2090 aaPredicted RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 TCRBV5S2A0A599 114 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 hCG_2039718K7EN88 272 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 OR7A17O14581 309 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 XPNPEP2O43895 674 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 FUCA1P04066 466 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 MATN1P21941 496 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 RXRGP48443 463 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 BTG3Q14201 252 aaPredicted RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 ADCK1Q86TW2 530 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 FRS2Q8WU20 508 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 PLEKHA8Q96JA3 519 aa18.07■□□□□ 0.48
LRP3-201ENST00000253193 RBM4BQ9BQ04 359 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 RBM4Q9BWF3 364 aaKnown RBP18.07■□□□□ 0.48
LRP3-201ENST00000253193 C1orf109Q9NX04 203 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms