RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SUN2Q9UH99 717 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 GMNNO75496 209 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 SELPP16109 830 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 FSHRP23945 695 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 LSM3P62310 102 aaKnown RBP18.59■□□□□ 0.57
SNX4-201ENST00000251775 SP3Q02447 781 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 SMARCB1Q12824 385 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 SF3B4Q15427 424 aaKnown RBP eCLIP18.59■□□□□ 0.579e-6■■□□□ 14.4
SNX4-201ENST00000251775 MAPK11Q15759 364 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 HIST2H2ACQ16777 129 aaPredicted RBP18.59■□□□□ 0.57
SNX4-201ENST00000251775 DGUOKQ16854 277 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 C6orf183Q5T699 404 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 TMEM236Q5W0B7 351 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 CYP2U1Q7Z449 544 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 ZFAND4Q86XD8 727 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 BCL7BQ9BQE9 202 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 NACA2Q9H009 215 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 TPK1Q9H3S4 243 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 EHD1Q9H4M9 534 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 SYTL2Q9HCH5 934 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 USE1Q9NZ43 259 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 ZIM2Q9NZV7 527 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 ZNF225Q9UK10 706 aa18.59■□□□□ 0.57
SNX4-201ENST00000251775 SUPT3HB4E1H0 165 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 H7C4K7 107 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 SNX2O60749 519 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 KERAO60938 352 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 RPL17P18621 184 aaKnown RBP18.58■□□□□ 0.57
SNX4-201ENST00000251775 ACVR2AP27037 513 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 SLC11A2P49281 568 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 LAPTM5Q13571 262 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 TAF1AQ15573 450 aaPredicted RBP18.58■□□□□ 0.57
SNX4-201ENST00000251775 TSNQ15631 228 aaKnown RBP18.58■□□□□ 0.57
SNX4-201ENST00000251775 ENPP6Q6UWR7 440 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 ANKS3Q6ZW76 656 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 SYVN1Q86TM6 617 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 STAG3L4Q8TBR4 150 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 GLMNQ92990 594 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 TTPALQ9BTX7 342 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 DERL2Q9GZP9 239 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 NECTIN3Q9NQS3 549 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 SMPD4Q9NXE4 827 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 TAS2R13Q9NYV9 303 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 DNAJB9Q9UBS3 223 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 KLHL3Q9UH77 587 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 UTS2RQ9UKP6 389 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 PCDHGC4Q9Y5F7 938 aa18.58■□□□□ 0.57
SNX4-201ENST00000251775 LOC100130705A0A1B0GUX0 176 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 EIF2S1P05198 315 aaKnown RBP18.58■□□□□ 0.56
SNX4-201ENST00000251775 VBP1P61758 197 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 ERVK-8P63133 956 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 PTPRRQ15256 657 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 ZNF691Q5VV52 312 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 AFTPHQ6ULP2 937 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 FBXO39Q8N4B4 442 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 DYNC2LI1Q8TCX1 351 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 C17orf50Q8WW18 174 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 ACOX2Q99424 681 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 GPR21Q99679 349 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 GKN1Q9NS71 199 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 THG1LQ9NWX6 298 aaKnown RBP18.58■□□□□ 0.56
SNX4-201ENST00000251775 SRRDQ9UH36 339 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 RNF112Q9ULX5 631 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 PCDHGB1Q9Y5G3 927 aa18.58■□□□□ 0.56
SNX4-201ENST00000251775 CDC7O00311 574 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 COCHO43405 550 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 XPNPEP2O43895 674 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 NDUFS3O75489 264 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 ECI2O75521 394 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 CST1P01037 141 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 ANKS6Q68DC2 871 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 THOC7Q6I9Y2 204 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 LPCAT1Q8NF37 534 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 C2orf15Q8WU43 125 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 LRFN2Q9ULH4 789 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 NEUROG3Q9Y4Z2 214 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 LCHNA4D1U4 455 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 TTC34A8MYJ7 566 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 F11P03951 625 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 RPS17P08708 135 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 SERPINB10P48595 397 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 PPP1R8Q12972 351 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 CATSPEREQ5SY80 951 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 LHX8Q68G74 356 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 PSAPL1Q6NUJ1 521 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 UGT3A1Q6NUS8 523 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 ADCK1Q86TW2 530 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 PIANPQ8IYJ0 282 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 FBXO30Q8TB52 745 aa18.57■□□□□ 0.56
SNX4-201ENST00000251775 PHF10Q8WUB8 498 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 RBM4BQ9BQ04 359 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 RBM4Q9BWF3 364 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 NUSAP1Q9BXS6 441 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 INTS6Q9UL03 887 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
SNX4-201ENST00000251775 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 FAM47E-STBD1D6RA91 191 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ARVCFO00192 962 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms