RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MICALCLQ6ZW33 695 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 SNX20Q7Z614 316 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ATCAYQ86WG3 371 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 CCDC50Q8IVM0 306 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 CDKL3Q8IVW4 592 aaPredicted RBP10.01□□□□□ -0.81
VPS50-201ENST00000251739 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 MR1Q95460 341 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ULK4Q96C45 1275 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 SPATA13Q96N96 652 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 NRTNQ99748 197 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 CCM2Q9BSQ5 444 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 NLNQ9BYT8 704 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 COG4Q9H9E3 785 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 PCMTD2Q9NV79 361 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 FAM8A1Q9UBU6 413 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 PCDHGB7Q9Y5F8 929 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 HEBP2Q9Y5Z4 205 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 CREBBPQ92793 2442 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ARGFXA6NJG6 315 aa10□□□□□ -0.81
VPS50-201ENST00000251739 H3BMH7 237 aa10□□□□□ -0.81
VPS50-201ENST00000251739 H7C0C1 242 aa10□□□□□ -0.81
VPS50-201ENST00000251739 H7C0S8 307 aa10□□□□□ -0.81
VPS50-201ENST00000251739 BTN3A1O00481 513 aa10□□□□□ -0.81
VPS50-201ENST00000251739 POLBP06746 335 aa10□□□□□ -0.81
VPS50-201ENST00000251739 RBP3P10745 1247 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ST6GAL1P15907 406 aa10□□□□□ -0.81
VPS50-201ENST00000251739 POLR2CP19387 275 aaPredicted RBP10□□□□□ -0.81
VPS50-201ENST00000251739 ITGALP20701 1170 aa10□□□□□ -0.81
VPS50-201ENST00000251739 PTMSP20962 102 aa10□□□□□ -0.81
VPS50-201ENST00000251739 PSMA3P25788 255 aa10□□□□□ -0.81
VPS50-201ENST00000251739 PRDX3P30048 256 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 ATP5OP48047 213 aa10□□□□□ -0.81
VPS50-201ENST00000251739 CD151P48509 253 aa10□□□□□ -0.81
VPS50-201ENST00000251739 PGDP52209 483 aa10□□□□□ -0.81
VPS50-201ENST00000251739 PDE1BQ01064 536 aa10□□□□□ -0.81
VPS50-201ENST00000251739 BOP1Q14137 746 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 GPR33Q49SQ1 333 aa10□□□□□ -0.81
VPS50-201ENST00000251739 NADK2Q4G0N4 442 aa10□□□□□ -0.81
VPS50-201ENST00000251739 FAM69BQ5VUD6 431 aa10□□□□□ -0.81
VPS50-201ENST00000251739 KCTD11Q693B1 232 aa10□□□□□ -0.81
VPS50-201ENST00000251739 SARM1Q6SZW1 724 aa10□□□□□ -0.81
VPS50-201ENST00000251739 TRIM46Q7Z4K8 759 aa10□□□□□ -0.81
VPS50-201ENST00000251739 SYTL1Q8IYJ3 562 aa10□□□□□ -0.81
VPS50-201ENST00000251739 CFAP206Q8IYR0 622 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ENDOVQ8N8Q3 282 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 Q8NA96 180 aa10□□□□□ -0.81
VPS50-201ENST00000251739 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
VPS50-201ENST00000251739 HEXDCQ8WVB3 486 aa10□□□□□ -0.81
VPS50-201ENST00000251739 CPT1BQ92523 772 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ALG3Q92685 438 aa10□□□□□ -0.81
VPS50-201ENST00000251739 COPS8Q99627 209 aa10□□□□□ -0.81
VPS50-201ENST00000251739 SLC25A23Q9BV35 468 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ING2Q9H160 280 aa10□□□□□ -0.81
VPS50-201ENST00000251739 TFB2MQ9H5Q4 396 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 SYTL2Q9HCH5 934 aa10□□□□□ -0.81
VPS50-201ENST00000251739 ATP13A2Q9NQ11 1180 aa10□□□□□ -0.81
VPS50-201ENST00000251739 SOHLH2Q9NX45 425 aa10□□□□□ -0.81
VPS50-201ENST00000251739 FEZ2Q9UHY8 353 aaPredicted RBP10□□□□□ -0.81
VPS50-201ENST00000251739 CRLS1Q9UJA2 301 aa10□□□□□ -0.81
VPS50-201ENST00000251739 TCFL5Q9UL49 500 aa10□□□□□ -0.81
VPS50-201ENST00000251739 AAR2Q9Y312 384 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10□□□□□ -0.81
VPS50-201ENST00000251739 PCDHA3Q9Y5H8 950 aa10□□□□□ -0.81
VPS50-201ENST00000251739 COLEC10Q9Y6Z7 277 aa10□□□□□ -0.81
VPS50-201ENST00000251739 DIDO1Q9BTC0 2240 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
VPS50-201ENST00000251739 BLACEA4D250 179 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 TMEM150CB9EJG8 249 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CCL22O00626 93 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CRTAMO95727 393 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 KLK3P07288 261 aaPredicted RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 RALBP11234 206 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ATP1B2P14415 290 aaPredicted RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 CDH3P22223 829 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ACRV1P26436 265 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 PDHA2P29803 388 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 HADHAP40939 763 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 SCTRP47872 440 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 GABRA4P48169 554 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CDKN1CP49918 316 aaPredicted RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 ITGA1P56199 1179 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 EIF3EP60228 445 aaKnown RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 PRKAA1Q13131 559 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 RPA4Q13156 261 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 NCF4Q15080 339 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ARMC6Q6NXE6 501 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 MRPL14Q6P1L8 145 aaKnown RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 PIANPQ8IYJ0 282 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ADGRF3Q8IZF5 1079 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ZBTB2Q8N680 514 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 LRRC57Q8N9N7 239 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 GLIS1Q8NBF1 620 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 OR52E1Q8NGJ3 308 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 FLVCR1-AS1Q8TAF5 88 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CCDC110Q8TBZ0 833 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CPT1CQ8TCG5 803 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms