RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 SFRP1Q8N474 314 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ZCCHC9Q8N567 271 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 CNTD1Q8N815 330 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 POF1BQ8WVV4 589 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 RBPMSQ93062 196 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 KIAA1191Q96A73 305 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ZBED3Q96IU2 234 aaPredicted RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 ZNF285Q96NJ3 590 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TMEM74Q96NL1 305 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 NEU1Q99519 415 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ZSWIM1Q9BR11 485 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TRIM62Q9BVG3 475 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 GAREM1Q9H706 876 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 BIN3Q9NQY0 253 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 GTF2A1LQ9UNN4 478 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 AFG3L2Q9Y4W6 797 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 E5RJQ4 531 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 F5H423 210 aaPredicted RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 DLGAP1O14490 977 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ACOT8O14734 319 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 S100A8P05109 93 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 RNF224P0DH78 156 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ATF2P15336 505 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 CSF2RAP15509 400 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 RAB4AP20338 218 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 POLR2IP36954 125 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 AKR1D1P51857 326 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 AQP5P55064 265 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TAS2R60P59551 318 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 DYNLT1P63172 113 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 MRPS5P82675 430 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 SMAD4Q13485 552 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.51
RFX4-201ENST00000229387 ANGPT1Q15389 498 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 THEM4Q5T1C6 240 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TIGD7Q6NT04 549 aaPredicted RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 NAPRTQ6XQN6 538 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 RAB43Q86YS6 212 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TMEM192Q8IY95 271 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 RNF149Q8NC42 400 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 GLB1L3Q8NCI6 653 aaPredicted RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 C11orf65Q8NCR3 313 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 PPHLN1Q8NEY8 458 aaKnown RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 OR13J1Q8NGT2 312 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 VPS39Q96JC1 886 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 SIGLEC10Q96LC7 697 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 MFSD14AQ96MC6 490 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 APOL4Q9BPW4 351 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 MSTO1Q9BUK6 570 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 ADI1Q9BV57 179 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 SPATA9Q9BWV2 254 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 MMP27Q9H306 513 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 C11orf49Q9H6J7 331 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 TXNRD2Q9NNW7 524 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 CHST7Q9NS84 486 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 CCM2LQ9NUG4 571 aaPredicted RBP5.61□□□□□ -1.51
RFX4-201ENST00000229387 FAM86C1Q9NVL1 165 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 BABAM2Q9NXR7 383 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 BFARQ9NZS9 450 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 PLCL2Q9UPR0 1127 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 NAALAD2Q9Y3Q0 740 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 CDY2AQ9Y6F7 541 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 DGKBQ9Y6T7 804 aa5.61□□□□□ -1.51
RFX4-201ENST00000229387 CCDC182A6NF36 153 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 AGAP5A6NIR3 686 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 KRBOX1C9JBD0 128 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 STX7O15400 261 aaKnown RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 GUCA1CO95843 209 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 PSAPP07602 524 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 ADORA3P0DMS8 318 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 PRG2P13727 222 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 BGNP21810 368 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 PTAFRP25105 342 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 HLA-DMAP28067 261 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 MAPK4P31152 587 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 ETV6P41212 452 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 MAPK9P45984 424 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 CLCN3P51790 818 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 NRLP54845 237 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 CDH4P55283 916 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 CDH8P55286 799 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 PER3P56645 1201 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 RPL7AP62424 266 aaKnown RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 CYP24A1Q07973 514 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 STX5Q13190 355 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 CLN3Q13286 438 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 SMAD1Q15797 465 aaKnown RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 TMEM44Q2T9K0 475 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 AP5B1Q2VPB7 878 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 GFOD2Q3B7J2 385 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 TEX44Q53QW1 395 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 PABPC1L2AQ5JQF8 200 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 TDRD10Q5VZ19 366 aaKnown RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 TEX261Q6UWH6 196 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 ZYG11AQ6WRX3 759 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 ZNF517Q6ZMY9 492 aaPredicted RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 ENOSF1Q7L5Y1 443 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 SNX20Q7Z614 316 aa5.6□□□□□ -1.51
RFX4-201ENST00000229387 SLC13A5Q86YT5 568 aaPredicted RBP5.6□□□□□ -1.51
RFX4-201ENST00000229387 CRLF3Q8IUI8 442 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms