RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 IRF1P10914 325 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SPNP16150 400 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 CASP3P42574 277 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SCNN1GP51170 649 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 GRSF1Q12849 480 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRDM4-201ENST00000228437 CEP78Q5JTW2 689 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 TMPRSS11AQ6ZMR5 421 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 CYP4Z1Q86W10 505 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 METTL4Q8N3J2 472 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SH3RF2Q8TEC5 729 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 EEF1AKMT1Q8WVE0 214 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 DIRAS2Q96HU8 199 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SMIM14Q96QK8 99 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 BARD1Q99728 777 aaKnown RBP14.28□□□□□ -0.12
PRDM4-201ENST00000228437 ITPAQ9BY32 194 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 TUBB1Q9H4B7 451 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 AIG1Q9NVV5 245 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 TAS2R9Q9NYW1 312 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 CTDSP2O14595 271 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 ATF4P18848 351 aaPredicted RBP14.28□□□□□ -0.12
PRDM4-201ENST00000228437 HTR1EP28566 365 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 KRT6CP48668 564 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
PRDM4-201ENST00000228437 UGT3A2Q3SY77 523 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SIRPB2Q5JXA9 342 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 FKBP1CQ5VVH2 108 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 MOB2Q70IA6 237 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 SVOPLQ8N434 492 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 CCNB1IP1Q9NPC3 277 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 PCDHA9Q9Y5H5 950 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
PRDM4-201ENST00000228437 C12orf71A8MTZ7 269 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 TSPAN4O14817 238 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 AP2A2O94973 939 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 S1PR4O95977 384 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 FHP07954 510 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 RGS4P49798 205 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 GNG2P59768 71 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 SRP54P61011 504 aaKnown RBP14.27□□□□□ -0.12
PRDM4-201ENST00000228437 SOX4Q06945 474 aaPredicted RBP14.27□□□□□ -0.12
PRDM4-201ENST00000228437 QPRTQ15274 297 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 XAF1Q6GPH4 301 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 TMEM151AQ8N4L1 468 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 EFHD2Q96C19 240 aaPredicted RBP14.27□□□□□ -0.12
PRDM4-201ENST00000228437 VPS35Q96QK1 796 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 IL4I1Q96RQ9 567 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 NME7Q9Y5B8 376 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 PCDHGC4Q9Y5F7 938 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 E9PAM4 449 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 ITGB1P05556 798 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 STSP08842 583 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 CHRNB1P11230 501 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 POLD2P49005 469 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 HNRNPFP52597 415 aaKnown RBP14.27□□□□□ -0.12
PRDM4-201ENST00000228437 SEMG2Q02383 582 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 PLET1Q6UQ28 207 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 CRYBG2Q8N1P7 616 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 CLPBQ9H078 707 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 PLSCR3Q9NRY6 295 aa14.27□□□□□ -0.12
PRDM4-201ENST00000228437 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 THP07101 528 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 CTPS1P17812 591 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 DDX5P17844 614 aaKnown RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 MC4RP32245 332 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 PPP3CCP48454 512 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 TBX4P57082 545 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 ELP6Q0PNE2 266 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 TSTQ16762 297 aaKnown RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 FAM187BQ17R55 369 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 BCL7AQ4VC05 210 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 RFTN2Q52LD8 501 aaPredicted RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 DCP2Q8IU60 420 aaKnown RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 SLC22A15Q8IZD6 547 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 UHRF1Q96T88 793 aaPredicted RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 SMOQ99835 787 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 PDGFDQ9GZP0 370 aaPredicted RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 POLR1EQ9GZS1 481 aaKnown RBP14.27□□□□□ -0.13
PRDM4-201ENST00000228437 HDHD2Q9H0R4 259 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 SLC25A51Q9H1U9 297 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 HSPB11Q9Y547 144 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 USP3Q9Y6I4 520 aa14.27□□□□□ -0.13
PRDM4-201ENST00000228437 SLC7A4O43246 635 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 OR1I1O60431 355 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 TBX18O95935 607 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 ARNTP27540 789 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 PON2Q15165 354 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 ZNF284Q2VY69 593 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 TMEM207Q6UWW9 146 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 EIF3MQ7L2H7 374 aaKnown RBP14.26□□□□□ -0.13
PRDM4-201ENST00000228437 OR4F6Q8NGB9 312 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 ADAMTS16Q8TE57 1224 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 MUL1Q969V5 352 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 NHSQ6T4R5 1651 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 SERPINI2O75830 405 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 SPIBQ01892 262 aa14.26□□□□□ -0.13
PRDM4-201ENST00000228437 LRIT3Q3SXY7 679 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms