RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 PKP3Q9Y446 797 aa14.09□□□□□ -0.15
SFXN3-201ENST00000224807 CSF2P04141 144 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 SLC10A3P09131 477 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 SLC26A2P50443 739 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 CRISP3P54108 245 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 MXD1Q05195 221 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 PON2Q15165 354 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 DDR2Q16832 855 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 ADHFE1Q8IWW8 467 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 TRIM48Q8IWZ4 208 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 RIMKLAQ8IXN7 391 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 REXO5Q96IC2 774 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 TSEN34Q9BSV6 310 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 NUAK2Q9H093 628 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 MRGBPQ9NV56 204 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 PAQR5Q9NXK6 330 aaPredicted RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 TRMT6Q9UJA5 497 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 SAMHD1Q9Y3Z3 626 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 HS3ST4Q9Y661 456 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 PLXNA1Q9UIW2 1896 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 MEN1O00255 615 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 SLC22A1O15245 554 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 TSC22D2O75157 780 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 GPR15P49685 360 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 VARS2Q5ST30 1063 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 NXNL2Q5VZ03 156 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 DLEU7Q6UYE1 221 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 MBOAT1Q6ZNC8 495 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 LIX1Q8N485 282 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 TTC29Q8NA56 475 aaPredicted RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 OR4F6Q8NGB9 312 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 OR56A4Q8NGH8 313 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 KAT8Q9H7Z6 458 aaKnown RBP14.08□□□□□ -0.16
SFXN3-201ENST00000224807 PCDHGC4Q9Y5F7 938 aa14.08□□□□□ -0.16
SFXN3-201ENST00000224807 FAM234BA2RU67 622 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 TRIM64A6NGJ6 449 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 CTDSP2O14595 271 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 PER2O15055 1255 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 POU1F1P28069 291 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 POLD2P49005 469 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 BEX3Q00994 111 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 DDX39BQ13838 428 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 NECAB2Q7Z6G3 386 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 LINC01465Q8N7H1 131 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 SLC13A3Q8WWT9 602 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 FUBP1Q96AE4 644 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 ULK4Q96C45 1275 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 NEDD4LQ96PU5 975 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 TMEM246Q9BRR3 403 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 YTHDF1Q9BYJ9 559 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 RMND5AQ9H871 391 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 NMUR1Q9HB89 426 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 TPRKBQ9Y3C4 175 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 ZSWIM8A7E2V4 1837 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 MATN4O95460 622 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 APOA1P02647 267 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 JUNBP17275 347 aaPredicted RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 GGT1P19440 569 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 AKT1P31749 480 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 CASP3P42574 277 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 TGM4P49221 684 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 RENBPP51606 427 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 PPP5CP53041 499 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 KCNC4Q03721 635 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 BCL2A1Q16548 175 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 ZNF404Q494X3 552 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 ZCCHC8Q6NZY4 707 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 MMAAQ8IVH4 418 aaKnown RBP14.07□□□□□ -0.16
SFXN3-201ENST00000224807 METTL4Q8N3J2 472 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 LEMD2Q8NC56 503 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 RHOXF1Q8NHV9 184 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 SLC9A7Q96T83 725 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 HOXD1Q9GZZ0 328 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 MIOSQ9NXC5 875 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
SFXN3-201ENST00000224807 PTGESO14684 152 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 MUSKO15146 869 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 LDB2O43679 373 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PCMT1P22061 227 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ATP4BP51164 291 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ARHGDIAP52565 204 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CD83Q01151 205 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CREMQ03060 361 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 C11orf74Q86VG3 221 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PIANPQ8IYJ0 282 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 RNF175Q8N4F7 328 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CLDN19Q8N6F1 224 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 INPP5KQ9BT40 448 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SLC25A51Q9H1U9 297 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms