RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZNF177Q13360 481 aaPredicted RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 SGO1Q5FBB7 561 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 SPANXN4Q5MJ08 99 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 GRAMD4Q6IC98 578 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 MSRB3Q8IXL7 192 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CRIPAKQ8N1N5 446 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 TRUB1Q8WWH5 349 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 MAGED4Q96JG8 741 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 SLC25A37Q9NYZ2 338 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 PCDHB7Q9Y5E2 793 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 SLC38A8A6NNN8 435 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 H7C0S8 307 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 PRMT5O14744 637 aaPredicted RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 RGS14O43566 566 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 HS6ST1O60243 411 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CLDN11O75508 207 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 ALDH2P05091 517 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 SLC11A1P49279 550 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RAB15P59190 212 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CACNG1Q06432 222 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 TWF1Q12792 350 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 MTA1Q13330 715 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 GTDC1Q4AE62 458 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RNF219Q5W0B1 726 aaPredicted RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 PTRHD1Q6GMV3 140 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 TMEM179BQ7Z7N9 219 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 STK40Q8N2I9 435 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 SVOPLQ8N434 492 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 LIX1Q8N485 282 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 KRTCAP2Q8N6L1 136 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 PJA1Q8NG27 643 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RBM4BQ9BQ04 359 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 RBM4Q9BWF3 364 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 DPY30Q9C005 99 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CIPCQ9C0C6 399 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RAD21L1Q9H4I0 556 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 EXD2Q9NVH0 621 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 GNPTGQ9UJJ9 305 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 DOLKQ9UPQ8 538 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 ANGPTL3Q9Y5C1 460 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
USB1-201ENST00000219281 ILVBLA1L0T0 632 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 CFAP99D6REC4 459 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 FUCA1P04066 466 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 EPS8Q12929 822 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 SPCS2Q15005 226 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 DPY19L1Q2PZI1 675 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 LDLRAP1Q5SW96 308 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 LAIR2Q6ISS4 152 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 FAM43BQ6ZT52 329 aaPredicted RBP16.93■□□□□ 0.3
USB1-201ENST00000219281 TAS1R1Q7RTX1 841 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 ABI1Q8IZP0 508 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 FRS2Q8WU20 508 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 EID2BQ96D98 161 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 EGFL8Q99944 293 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 APOL5Q9BWW9 433 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 USE1Q9NZ43 259 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 KLQ9UEF7 1012 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 INVSQ9Y283 1065 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 PKP3Q9Y446 797 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 DGKBQ9Y6T7 804 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 FUOMA2VDF0 154 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 CTPS1P17812 591 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 ARF5P84085 180 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 GPR17Q13304 367 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 ITGADQ13349 1161 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 AQP6Q13520 282 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 RUNDC3AQ59EK9 446 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 CRTC3Q6UUV7 619 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 GCNT7Q6ZNI0 430 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 CLHC1Q8NHS4 586 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 NCLNQ969V3 563 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 FKBP10Q96AY3 582 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 GPR63Q9BZJ6 419 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 IL17CQ9P0M4 197 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 BAG5Q9UL15 447 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 PCDHB9Q9Y5E1 797 aa16.93■□□□□ 0.3
USB1-201ENST00000219281 LOC100130705A0A1B0GUX0 176 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 PTGES3LE9PB15 166 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 XYLBO75191 536 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 BCAS1O75363 584 aaPredicted RBP16.92■□□□□ 0.3
USB1-201ENST00000219281 SCELO95171 688 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 KLKB1P03952 638 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 PGRP06401 933 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 ATF6P18850 670 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 MSH3P20585 1137 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 CA5AP35218 305 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 PHEXP78562 749 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 PON2Q15165 354 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 RTP2Q5QGT7 225 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 NCEH1Q6PIU2 408 aa16.92■□□□□ 0.3
USB1-201ENST00000219281 LKAAEAR1Q8TD35 194 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms