RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 EIF3FO00303 357 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 APOL3O95236 402 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 TFAP2AP05549 437 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 OR56A5P0C7T3 313 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 RRM2P31350 389 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 FEN1P39748 380 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PIK3CGP48736 1102 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 NRG1Q02297 640 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 LCP2Q13094 533 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PLD1Q13393 1074 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 TNFAIP8L3Q5GJ75 292 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 GALNT7Q86SF2 657 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 ARFGAP1Q8N6T3 406 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PTBP2Q9UKA9 531 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 TBC1D30Q9Y2I9 924 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 BCKDKO14874 412 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PIP5K1BO14986 540 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 NUPL2O15504 423 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 IRAK2O43187 625 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 ZBTB14O43829 449 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 F2P00734 622 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 GSTM1P09488 218 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 MYL12AP19105 171 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 CYP2A7P20853 494 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 GTF2E2P29084 291 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 SLC7A1P30825 629 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 HTR7P34969 479 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 GMPRP36959 345 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 IRF8Q02556 426 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 OSTM1Q86WC4 334 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 SYT12Q8IV01 421 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 C1QTNF1Q9BXJ1 281 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 EIF3KQ9UBQ5 218 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PRMT5O14744 637 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 PBX3P40426 434 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 CSNK2BP67870 215 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 GSTM4Q03013 218 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 LIPEQ05469 1076 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 STARD3Q14849 445 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 AP5B1Q2VPB7 878 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 RFX4Q33E94 735 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 RBM20Q5T481 1227 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 DPY19L3Q6ZPD9 716 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 C11orf96Q7Z7L8 435 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 ADGRG6Q86SQ4 1221 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 Q8N9G6 341 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 OR2T12Q8NG77 320 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 STYXQ8WUJ0 223 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 REXO5Q96IC2 774 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 AMBNQ9NP70 447 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 CNTN3Q9P232 1028 aa11.94□□□□□ -0.5
TSPAN9-201ENST00000011898 MCM3APO60318 1980 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 LOXHD1Q8IVV2 1947 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 OR51F1A6NGY5 319 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 STMND1H3BQB6 276 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 SLC22A2O15244 555 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 ORC5O43913 435 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 GOT2P00505 430 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 IFNA7P01567 189 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 RPS3P23396 243 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■■□□ 16.8
TSPAN9-201ENST00000011898 TIE1P35590 1138 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 CHI3L1P36222 383 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 MTHFRP42898 656 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 ETV4P43268 484 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 HCAR3P49019 387 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 STK11Q15831 433 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 PARP15Q460N3 678 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 TPGS1Q6ZTW0 290 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 CIR1Q86X95 450 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 RAB42Q8N4Z0 105 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 AADATQ8N5Z0 425 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 JPH3Q8WXH2 748 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 KCTD13Q8WZ19 329 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 CCDC120Q96HB5 630 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 TMEM138Q9NPI0 162 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 SLC2A6Q9UGQ3 507 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 PCDHGC4Q9Y5F7 938 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 HTRA2O43464 458 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 OR2B3O76000 313 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 SIX3O95343 332 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 IGSF6O95976 241 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 VANGL1Q8TAA9 524 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 TMEM174Q8WUU8 243 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 MOCOSQ96EN8 888 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 CCDC106Q9BWC9 280 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 ALG2Q9H553 416 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 EXD2Q9NVH0 621 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
TSPAN9-201ENST00000011898 ACTR3BQ9P1U1 418 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms