RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Mapk10Q61831 464 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 PtprjQ64455 1238 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Znf366Q6NS86 746 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Sra1Q80VJ2 232 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Kirrel1Q80W68 789 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cfap20Q8BTU1 193 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tprg1Q8CB49 279 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rbm12Q8R4X3 992 aaKnown RBP13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 PrkxQ922R0 355 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Stard13Q923Q2 1113 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ccdc81Q9D5W4 654 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc7a8Q9QXW9 531 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rnf11Q9QYK7 154 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Dio2Q9Z1Y9 266 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 TriobpQ99KW3 2014 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Sirpb1aA0A0A6YYP6 397 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Olfr1145A2AVC7 325 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Vmn2r114E9Q281 856 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Vmn2r65G3X931 845 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm11236J3QMS7 360 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Serpina3mQ03734 418 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Inf2Q0GNC1 1273 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 CcnhQ61458 323 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Hesx1Q61658 185 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Fads6Q80UG1 342 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Zbtb24Q80X44 710 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Eme1Q8BJW7 570 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gpc2Q8BKV1 579 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mpp7Q8BVD5 576 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ttc34Q8C0Q3 554 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ugt2b1Q8R084 529 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Vps4aQ8VEJ9 437 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Akirin1Q99LF1 191 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Retreg3Q9CQV4 466 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Themis3Q9CU24 569 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Q9D3J9 298 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Uba7Q9DBK7 977 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Psmd13Q9WVJ2 376 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Kctd14A0A0U1RNG7 287 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Zfp938E9Q9G3 579 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm17615E9Q9P2 165 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Elovl3O35949 271 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tfap2aP34056 437 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Id2P41136 134 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Neurog1P70660 244 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Bmp1P98063 991 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Larp7Q05CL8 570 aaKnown RBP13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc22a23Q3UHH2 689 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tmem247Q497K7 211 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 NkaplQ5SZT7 395 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Paqr3Q6TCG8 311 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mfn1Q811U4 741 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc2a12Q8BFW9 622 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mterf1aQ8CHZ9 379 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ptgr1Q91YR9 329 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Plpp3Q99JY8 312 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Msh4Q99MT2 958 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Trim33Q99PP7 1142 aa13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Clic1Q9Z1Q5 241 aaKnown RBP13.01□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rpl7a-ps3A0A140T8L1 270 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm4924A0A1B0GR71 966 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mllt3A2AM29 569 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Olfr1200A2ATJ4 336 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Vmn2r120E9PX34 856 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Kcnc1P15388 511 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 CtsdP18242 410 aaKnown RBP13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 PnpP23492 289 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Kir3dl1P83555 432 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 LvrnQ2KHK3 559 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Zmat1Q3V0C1 714 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tmem199Q5SYH2 208 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 PtprnQ60673 979 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ppp1r14bQ62084 147 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Il17aQ62386 158 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cdkn3Q810P3 211 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tmem62Q8BXJ9 643 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Nudt4Q8R2U6 179 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc5a9Q8VDT1 685 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mospd1Q8VEL0 213 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Depdc7Q91WS7 511 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pcdhga4Q91XY4 930 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ier5lQ99J55 406 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 St7Q99M96 577 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mtfr1Q99MB2 328 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Hacd2Q9D3B1 254 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Stx11Q9D3G5 287 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Zswim2Q9D9X6 631 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tssc4Q9JHE7 317 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm43951A0A0N4SUT6 962 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm9857F7CXR1 130 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Map2k3O09110 347 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 AladP10518 330 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ppp3cbP48453 525 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Amigo2Q80ZD9 519 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 IfneQ80ZF2 192 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ptpn7Q8BUM3 359 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Itpk1Q8BYN3 419 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cers6Q8C172 384 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Adgrg3Q8R0T6 542 aa13□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pcdhb21Q91V48 774 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms