RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rpl10Q6ZWV3 214 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mapkap1Q8BKH7 522 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Npsr1Q8BZP8 371 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pabpc5Q8C7D3 381 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 C1raQ8CG16 707 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mab21L3Q8CI17 429 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Plcl2Q8K394 1128 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr535Q8VGL3 312 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mthfd1Q922D8 935 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Clcc1Q99LI2 539 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mau2Q9D2X5 619 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Psmd13Q9WVJ2 376 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 AspmQ8CJ27 3122 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Unc13cQ8K0T7 2210 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 4921501E09RikA0A0R4J054 908 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Spin2dB1B0R2 236 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rrn3B2RS91 656 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atp6ap1lD3Z5W0 336 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 FgaE9PV24 789 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r103E9PWW0 856 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 G430095P16RikE9Q913 147 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rhox2gL7MUB9 191 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rundc3aO08576 446 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 E2f6O54917 272 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Inpp1P49442 396 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ppp2cbP62715 309 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ppp2caP63330 309 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nhlh1Q02576 133 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 RalgdsQ03385 852 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sec31bQ3TZ89 1158 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pacs2Q3V3Q7 862 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dna2Q6ZQJ5 1062 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr309Q7TS01 308 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prpf38bQ80SY5 542 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ppm1lQ8BHN0 360 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q8BHR8 331 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Znf775Q8BI73 538 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vrk2Q8BN21 503 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zfp446Q8C9M8 523 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 FntbQ8K2I1 437 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ptcd2Q8R3K3 381 aaKnown RBP8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr382Q8VF79 312 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Col26a1Q91VF6 440 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Chst15Q91XQ5 561 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gps2Q921N8 327 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 PinlypQ9CQD7 212 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Wdr73Q9CWR1 371 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lsm12Q9D0R8 195 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dnajb9Q9QYI6 222 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Col6a3E9PWQ3 3284 aa8.53□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr1480A0A140LIR8 359 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam131cA2ADB2 273 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r8L7N472 848 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Snx3O70492 162 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hoxb3P09026 433 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nckap1P28660 1128 aaKnown RBP8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lefty2P57785 368 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lhx1P63006 406 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rnf223Q3UV31 285 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc30a9Q5IRJ6 567 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 PtprnQ60673 979 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 PolnQ7TQ07 864 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Psmd11Q8BG32 422 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q8BGK9 164 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sfrp1Q8C4U3 314 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 RtknQ8C6B2 564 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 BtdQ8CIF4 520 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 FbrsQ8R089 466 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r87Q8R255 295 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slf1Q8R3P9 1054 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr525Q8VGL5 309 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 NcaldQ91X97 193 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Wdr55Q9CX97 388 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ilf2Q9CXY6 390 aaKnown RBP8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Capns2Q9D7J7 247 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Psmg2Q9EST4 264 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cyhr1Q9QXA1 311 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 PnckQ9QYK9 343 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Carm1Q9WVG6 608 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Bag6Q9Z1R2 1154 aaKnown RBP8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pdpk1Q9Z2A0 559 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pcsk5Q04592 1877 aa8.52□□□□□ -1.04
Trim39-201ENSMUST00000042717 Wdr49A0A0N4SUK7 710 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ttll2A4Q9E4 540 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm2897K7N6T7 172 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nrg3O35181 713 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 LtfP08071 707 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gpc4P51655 557 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tbx1P70323 479 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Kir3dl1P83555 432 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Htr4P97288 388 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Apcdd1Q3U128 514 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 CamkvQ3UHL1 512 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Havcr1Q5QNS5 305 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gucy2fQ5SDA5 1108 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 MarcoQ60754 518 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 RgnQ64374 299 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tpgs2Q66JT5 296 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc39a14Q75N73 489 aa8.52□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1418Q7TQS3 318 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms