RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cd6Q61003 665 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 FaddQ61160 205 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fam181bQ80VF6 417 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cpped1Q8BFS6 312 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rbbp5Q8BX09 538 aaKnown RBP12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mtrf1Q8K126 446 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ankrd61Q9CQM6 421 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ccdc70Q9D9B0 223 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 TrilQ9DBY4 809 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tuba8Q9JJZ2 449 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mad2l1Q9Z1B5 205 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r116E9Q6I0 856 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Inpp5aE9QAS7 422 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cbx4O55187 551 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cyp1a1P00184 524 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Psme2P97372 239 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tnks2Q3UES3 1166 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp78Q5U406 512 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Creb3Q61817 404 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 CilpQ66K08 1184 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Znf366Q6NS86 746 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cyp2r1Q6VVW9 501 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Scn4bQ7M729 228 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Arhgap19Q8BRH3 494 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fastkd3Q8BSN9 661 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cstf2tQ8C7E9 632 aaKnown RBP12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Galnt13Q8CF93 556 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gprc6aQ8K4Z6 928 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gorasp1Q91X51 446 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mapk8Q91Y86 384 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Clp1Q99LI9 425 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pdzd3Q99MJ6 498 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tmbim6Q9D2C7 237 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Efhd2Q9D8Y0 240 aaKnown RBP12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fam13cQ9DBR2 601 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr704Q9EPF6 315 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Aff4Q9ESC8 1160 aa12.47□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp964B2RR88 472 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r94E9PZK8 818 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm2237E9Q501 211 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r22E9Q7S8 853 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm3591K7N6X2 186 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ackr2O08707 378 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gtf2h4O70422 463 aaKnown RBP12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sh3pxd2aO89032 1124 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Naa11Q3UX61 218 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pex11gQ6P6M5 241 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Paqr3Q6TCG8 311 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sox11Q7M6Y2 395 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Epb41l5Q8BGS1 731 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cox14Q8BH51 57 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Dcaf12l1Q8CBW4 501 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ccdc71Q8VEG0 433 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pcdhb8Q91XZ2 779 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 4921530L21RikQ9CQ47 274 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Atp13a2Q9CTG6 1169 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Fam227aQ9D3V8 625 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rp1P56716 2095 aa12.46□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gm10477F6SW83 55 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mybpc3O70468 1270 aaKnown RBP12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Klf10O89091 479 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 QrfprP83861 433 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rbm15Q0VBL3 962 aaKnown RBP12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Naf1Q3UMQ8 489 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Trim75Q3UWZ0 467 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Klf4Q60793 483 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Dcaf13Q6PAC3 445 aaKnown RBP12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Defb14Q7TNV9 67 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olfr1355Q7TQU9 310 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olfr735Q7TRM4 354 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ftsj1Q8CBC7 324 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Wdr47Q8CGF6 920 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cant1Q8VCF1 403 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Zswim1Q9CWV7 455 aaKnown RBP12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fbxl20Q9CZV8 436 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ppil1Q9D0W5 166 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ninj2Q9JL89 143 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Smok1Q9QYZ4 484 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cldn8Q9Z260 225 aa12.46□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm14459A2BI73 179 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 CercamA3KGW5 592 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm8011K7N6Y5 207 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Hcn4O70507 1186 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Znf703P0CL69 594 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Chrm1P12657 460 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tead2P48301 445 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Epb42P49222 691 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Akr1c6P70694 323 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rbl1Q64701 1063 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rundc3bQ6PDC0 408 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rps9Q6ZWN5 194 aaKnown RBP12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Dsg1bQ7TSF1 1060 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ppp1r15bQ8BFW3 697 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 PolbQ8K409 335 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 ApofQ91V80 315 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cwh43Q91YL7 699 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mrps18bQ99N84 254 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cntd1Q9D995 334 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Adam21Q9JI76 729 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rpl38Q9JJI8 70 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms