RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Q3KNL4 93 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Otud5Q3U2S4 566 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Cep78Q6IRU7 790 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Zmpste24Q80W54 475 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Cyp20a1Q8BKE6 462 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Prkd3Q8K1Y2 889 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 BfarQ8R079 450 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Timd2Q8R183 305 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Mterf3Q8R3J4 412 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Zfp64Q99KE8 643 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 GrifinQ9D1U0 144 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 TesclQ9DAJ7 231 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Fezf2Q9ESP5 455 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Fam131cA2ADB2 273 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ncam2O35136 837 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Fgf10O35565 209 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Limk2O54785 638 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Vti1bO88384 232 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 DhfrP00375 187 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 F2P19221 618 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ptger1P35375 405 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gpr143P70259 405 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 WasP70315 520 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tead4Q62296 427 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Svs2Q8BS30 375 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Arhgap12Q8C0D4 838 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 PdgfcQ8CI19 345 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Cox4i2Q91W29 172 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Nipal2Q91WC7 383 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 MpstQ99J99 297 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Snx7Q9CY18 387 aa17.44■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Olfr1303A2AVW1 312 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 TagapB2RWW0 714 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Zfp780bE9Q2S6 806 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ctla2aP12399 137 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Hoxa2P31245 372 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 WarsP32921 481 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Nat2P50295 290 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Zfp607aQ3TQG9 686 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Pnpla1Q3V1D5 599 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Maml1Q6T264 1020 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Nipal1Q8BMW7 416 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 B430218F22RikQ8BQR5 223 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 N4bp2l2Q8JZS6 575 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Akr1d1Q8VCX1 325 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Aim2Q91VJ1 354 aaKnown RBP17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Pcdhga6Q91XY2 932 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tmem135Q9CYV5 458 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Il21Q9ES17 146 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gm21293E9Q4G9 266 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Alx3O70137 343 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tcea1P10711 301 aaKnown RBP17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Pou5f1P20263 352 aaKnown RBP17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Acod1P54987 488 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ptpn2Q06180 406 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 CenplQ3U3S3 329 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Arhgap1Q5FWK3 439 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Slc23a3Q60850 611 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 FukQ7TMC8 1090 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 GnsQ8BFR4 544 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Commd7Q8BG94 200 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Elmo1Q8BPU7 727 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Kcnk10Q8BUW1 535 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 4932411N23RikQ8C0S0 470 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 MafaQ8CF90 359 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tbc1d19Q8VDV7 526 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Olfr815Q8VFU0 316 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Mto1Q923Z3 669 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 MlycdQ99J39 492 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Dsn1Q9CYC5 348 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ppil2Q9D787 521 aa17.43■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Chil5A0A0G2JDS2 431 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gm5565A0A0G2JGB2 317 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 BC024063A0A1W2P7G7 749 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 A0A286YDU1 74 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gtf2h4O70422 463 aaKnown RBP17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Dsc3P55850 896 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Emx2Q04744 253 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Dmrtc1bQ2PMX6 267 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 SbplQ3TUY3 232 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Cdk10Q3UMM4 360 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Q3UST5 385 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Znf235Q61116 645 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Nr6a1Q64249 495 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ubtd2Q6PGH0 234 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gtf2a2Q80ZM7 109 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tdp1Q8BJ37 609 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Plac9Q8K262 108 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Agr3Q8R3W7 165 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tmem161aQ8VCA6 480 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Zcchc14Q8VIG0 956 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Chchd6Q91VN4 273 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Cbr4Q91VT4 236 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Fubp1Q91WJ8 651 aaKnown RBP17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Slc8b1Q925Q3 585 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Hddc3Q9D114 179 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Adgrf4Q9D2L6 698 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Gm16432A0A0A6YXX9 775 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Tbkbp1A2A9T0 611 aa17.42■□□□□ 0.38
Sqstm1-201ENSMUST00000015981 Ttll8A4Q9F1 832 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms