RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ccr3P51678 359 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Stat6P52633 837 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Hhla1Q3TYV2 514 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Elf3Q3UPW2 391 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ggt1Q60928 568 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Casd1Q7TN73 797 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Trmt12Q8BG71 446 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Slco6c1Q8C0X7 706 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Slc5a11Q8K0E3 673 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Imp4Q8VHZ7 291 aaKnown RBP11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Itfg1Q99KW9 610 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Nck1Q99M51 377 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 FancgQ9EQR6 623 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 B4galt6Q9WVK5 382 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ccdc166S4R181 449 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Arhgap36B1AUC7 590 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mroh5E9PUJ8 762 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Vmn1r176G3UW31 304 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Galnt9G3X942 604 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 MttpO08601 894 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Akap3O88987 864 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 P06324 132 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Chrm1P12657 460 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Atp1b2P14231 290 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Svs4P18419 113 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 F3P20352 294 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Lefty2P57785 368 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mrm3Q5ND52 418 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Hsd3b5Q61694 373 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Runx3Q64131 409 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Irf4Q64287 450 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Myl12aQ6ZWQ9 172 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Tyw3Q8BSA9 257 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Pwp2Q8BU03 919 aaKnown RBP11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Clrn1Q8K445 232 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Olfr1278Q8VF39 313 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Cwh43Q91YL7 699 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Usp12Q9D9M2 370 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Clcn2Q9R0A1 908 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mllt3A2AM29 569 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 FkbplO35450 347 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Mtx2O88441 263 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Rrm2P11157 390 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Upf3aQ3ULJ3 422 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Spire1Q52KF3 598 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Arl15Q8BGR6 204 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Ndst3Q9EQH7 873 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Jph2Q9ET78 696 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 PrepQ9QUR6 710 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Uts2Q9QZQ3 123 aa11.84□□□□□ -0.51
Ctr9-201ENSMUST00000005749 Vmn2r88L7N1W8 857 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 ClockO08785 855 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Nfatc2ipO09130 412 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Tyrp1P07147 537 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Psen1P49769 467 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Pdx1P52946 284 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Tnfaip8l3Q3TBL6 204 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Rnf44Q3UHJ8 407 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Armcx5Q3UZB0 606 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Taf1cQ6PDZ2 836 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 ScocQ78YZ6 125 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Epm2aip1Q8VEH5 606 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Pex6Q99LC9 981 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Ilf2Q9CXY6 390 aaKnown RBP11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Tmem135Q9CYV5 458 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 LipaQ9Z0M5 397 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Trpm6Q8CIR4 2028 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Zfp395E9Q5N9 508 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Gm20671F6TVX7 576 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Dnajb3O35723 242 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Tgfb3P17125 410 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Tnfsf9P41274 309 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Ddr1Q03146 911 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Pros1Q08761 675 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Fam105aQ3TVP5 353 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 StradaQ3UUJ4 431 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Six1Q62231 284 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Rbl1Q64701 1063 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Kansl2Q8BQR4 486 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Plpp3Q99JY8 312 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Wdr53Q9DB94 358 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Herpud2Q9JJC9 404 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 VapbQ9QY76 243 aaKnown RBP11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Gria3Q9Z2W9 888 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Scn9aQ62205 1984 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Actl10A2AKE7 346 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Vmn2r2L7N2E9 908 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Kcnk1O08581 336 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Gtpbp1O08582 668 aaKnown RBP11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Rgs7O54829 469 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Cd40lgP27548 260 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Lman2lP59481 347 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Mkl2P59759 1080 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 DtlQ3TLR7 729 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Ffar3Q3UFD7 319 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Ccser2Q3UHI0 833 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Smad2Q62432 467 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Sema4cQ64151 834 aa11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 Nomo1Q6GQT9 1214 aaKnown RBP11.83□□□□□ -0.52
Ctr9-201ENSMUST00000005749 KdsrQ6GV12 332 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms