RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	XYLB	O75191	536 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	BCL10	O95999	233 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	ATF6	P18850	670 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	ARF5	P84085	180 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	SPCS2	Q15005	226 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	LDLRAP1	Q5SW96	308 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	SPESP1	Q6UW49	350 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	PRR23B	Q6ZRT6	265 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	CENPS	Q8N2Z9	138 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	CLDN19	Q8N6F1	224 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	WBP2	Q969T9	261 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	RHBDF1	Q96CC6	855 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	AURKB	Q96GD4	344 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	CCDC115	Q96NT0	180 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	DGCR6L	Q9BY27	220 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	CIPC	Q9C0C6	399 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	NACA2	Q9H009	215 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	DNAJB9	Q9UBS3	223 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	FBXO10	Q9UK96	956 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	GABRQ	Q9UN88	632 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	TMEM98	Q9Y2Y6	226 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	COMMD10	Q9Y6G5	202 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021	CHD5	Q8TDI0	1954 aa		13.58	□□□□□ -0.24
PHGDH-233	ENST00000642021		K7EPI3	171 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SYN3	O14994	580 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	GSTA4	O15217	222 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	NOL3	O60936	208 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	EOMES	O95936	686 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	CTPS1	P17812	591 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	GSTM2	P28161	218 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	CYP4F3	Q08477	520 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	ATP1A4	Q13733	1029 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SKIV2L	Q15477	1246 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PHKG1	Q16816	387 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SGO1	Q5FBB7	561 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	CLHC1	Q8NHS4	586 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	ITCH	Q96J02	903 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	FAM193B	Q96PV7	902 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	UGT2B28	Q9BY64	529 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	ARMC7	Q9H6L4	198 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	ACTR8	Q9H981	624 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	IL17C	Q9P0M4	197 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	NT5C1B-RDH14	C9J2C7	533 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SCAMP3	O14828	347 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	AREL1	O15033	823 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	RHOC	P08134	193 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	ALPI	P09923	528 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	GATM	P50440	423 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	GPR17	Q13304	367 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	MAPKAPK3	Q16644	382 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	RTP2	Q5QGT7	225 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	RBM48	Q5RL73	367 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	TTC23	Q5W5X9	447 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SUSD1	Q6UWL2	747 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	HDAC2	Q92769	488 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC47A1	Q96FL8	570 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	FUNDC2	Q9BWH2	189 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PDE10A	Q9Y233	779 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PCDHB9	Q9Y5E1	797 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PRSS21	Q9Y6M0	314 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	DGKB	Q9Y6T7	804 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021		U3KQV3	271 aa		13.57	□□□□□ -0.24
PHGDH-233	ENST00000642021	PTGES3L	E9PB15	166 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021		H7C0S8	307 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	ARVCF	O00192	962 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	PRMT5	O14744	637 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	GMNN	O75496	209 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	B3GALT4	O96024	378 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	OTC	P00480	354 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	FSHR	P23945	695 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	HTR1B	P28222	390 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	ATP5C1	P36542	298 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	HUNK	P57058	714 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	ISL1	P61371	349 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	PHC1	P78364	1004 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	TWF1	Q12792	350 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	TUBA3C	Q13748	450 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	FAM26D	Q5JW98	314 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	RNF219	Q5W0B1	726 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	TAS1R1	Q7RTX1	841 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	BTLA	Q7Z6A9	289 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	LIX1	Q8N485	282 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	PJA1	Q8NG27	643 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	RAB2B	Q8WUD1	216 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	PDLIM5	Q96HC4	596 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	SPATA17	Q96L03	361 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	DHRS1	Q96LJ7	313 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	ADGRE3	Q9BY15	652 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	DNMT3L	Q9UJW3	386 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	COQ6	Q9Y2Z9	468 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	TNPO3	Q9Y5L0	923 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	ELOVL7	A1L3X0	281 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	FUOM	A2VDF0	154 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	SLC38A8	A6NNN8	435 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	CXCR6	O00574	342 aa		13.56	□□□□□ -0.24
PHGDH-233	ENST00000642021	GNGT2	O14610	69 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms