RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 UFM1P61960 85 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 TLR1Q15399 786 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ATP6AP1LQ52LC2 224 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 GPRC6AQ5T6X5 926 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 RNF220Q5VTB9 566 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 IRAK1BP1Q5VVH5 260 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 BRAT1Q6PJG6 821 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 MARVELD2Q8N4S9 558 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ZBTB2Q8N680 514 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 OR4F6Q8NGB9 312 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 OR2T34Q8NGX1 318 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 OR2T3Q8NH03 318 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ZUFSPQ96AP4 578 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 SLC45A3Q96JT2 553 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 MYADMQ96S97 322 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 EFHD1Q9BUP0 239 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 C1orf50Q9BV19 199 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 TRIM54Q9BYV2 358 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 NSUN3Q9H649 340 aaKnown RBP14.81□□□□□ -0.04
TRIM3-215ENST00000639856 TRPV4Q9HBA0 871 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ZFP14Q9HCL3 533 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 PCDH12Q9NPG4 1184 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ZDHHC4Q9NPG8 344 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 TMEM45AQ9NWC5 275 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 ZIM2Q9NZV7 527 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 GMPR2Q9P2T1 348 aaKnown RBP14.81□□□□□ -0.04
TRIM3-215ENST00000639856 DEC1Q9P2X7 70 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 CDH7Q9ULB5 785 aa14.81□□□□□ -0.04
TRIM3-215ENST00000639856 SYNCRIPO60506 623 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 GUCA1CO95843 209 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 OTCP00480 354 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 ASLP04424 464 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TIMP2P16035 220 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 CAPRIN1Q14444 709 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 SPATS1Q496A3 300 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 ATP13A5Q4VNC0 1218 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 UGT2A3Q6UWM9 527 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TMEM184AQ6ZMB5 413 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 CHCHD4Q8N4Q1 142 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 LRTOMTQ8WZ04 291 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 ERLEC1Q96DZ1 483 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 UHRF1Q96T88 793 aaPredicted RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 KXD1Q9BQD3 176 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 IPPKQ9H8X2 491 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 CMTM6Q9NX76 183 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 SLC8A2Q9UPR5 921 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 BRWD1Q9NSI6 2320 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 EYSQ5T1H1 3165 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 ASPDHA6ND91 283 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TAPBPO15533 448 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 KIF1CO43896 1103 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 EEDO75530 441 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 GRIA3P42263 894 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 HSPA13P48723 471 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 HSPA7P48741 367 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 SPINT3P49223 89 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 POLR2JP52435 117 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 CHN2P52757 468 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 ST8SIA6P61647 398 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 POLR2LP62875 67 aaKnown RBP14.8□□□□□ -0.04
TRIM3-215ENST00000639856 BNIP2Q12982 314 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TRAF3Q13114 568 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 IL27RAQ6UWB1 636 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 HSD11B1LQ7Z5J1 315 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 VPS33AQ96AX1 596 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 EME1Q96AY2 570 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TIFAQ96CG3 184 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 LATS2Q9NRM7 1088 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 SUN2Q9UH99 717 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 PCDHA9Q9Y5H5 950 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 AP4B1Q9Y6B7 739 aa14.8□□□□□ -0.04
TRIM3-215ENST00000639856 TSPAN11A1L157 253 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 CCDC154A6NI56 674 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 AP1G1O43747 822 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 ZNF26P17031 533 aaPredicted RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 ATP6V1B2P21281 511 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 NSG1P42857 185 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 HTR6P50406 440 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 YBX1P67809 324 aaKnown RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 DLX2Q07687 328 aaPredicted RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 NFYCQ13952 458 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 CRY1Q16526 586 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 PHKG1Q16816 387 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 FNDC3BQ53EP0 1204 aaKnown RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 ZNF805Q5CZA5 627 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 PAGE3Q5JUK9 113 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 ST13P4Q8IZP2 240 aaPredicted RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 SFRP1Q8N474 314 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 GALNT4Q8N4A0 578 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 PROKR1Q8TCW9 393 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 EGFL8Q99944 293 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 HEBP1Q9NRV9 189 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 ARMC1Q9NVT9 282 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
TRIM3-215ENST00000639856 OBP2AQ9NY56 170 aa14.79□□□□□ -0.04
TRIM3-215ENST00000639856 LEF1Q9UJU2 399 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms