RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 HGH1Q9BTY7 390 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 FICDQ9BVA6 458 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 XKR8Q9H6D3 395 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 NDOR1Q9UHB4 597 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 RSPH14Q9UHP6 348 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 FKBPLQ9UIM3 349 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 HEBP2Q9Y5Z4 205 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 LRBAP50851 2863 aa14.56□□□□□ -0.08
SYNE2-228ENST00000639659 TEP1Q99973 2627 aaKnown RBP14.55□□□□□ -0.08
SYNE2-228ENST00000639659 ARHGAP10A1A4S6 786 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 ZNF487B1APH4 448 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 MATN2O00339 956 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 BTN3A3O00478 584 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 GYPCP04921 128 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 CBSLP0DN79 551 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 CBSP35520 551 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 TMPRSS15P98073 1019 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 WASHC5Q12768 1159 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 PRKG2Q13237 762 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 C1QL3Q5VWW1 255 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 MFSD7Q6UXD7 560 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 CDHR3Q6ZTQ4 885 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 TRIM73Q86UV7 250 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 ZADH2Q8N4Q0 377 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 PHC3Q8NDX5 983 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 OR4K2Q8NGD2 314 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 SLC35G2Q8TBE7 412 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 HM13Q8TCT9 377 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 ZFPM2Q8WW38 1151 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 FAM96AQ9H5X1 160 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 SYTL2Q9HCH5 934 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 SMOXQ9NWM0 555 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 C5AR2Q9P296 337 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 SRPK3Q9UPE1 567 aa14.55□□□□□ -0.08
SYNE2-228ENST00000639659 CCDC88CQ9P219 2028 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 WIPF3A6NGB9 483 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 IFRD1O00458 451 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-228ENST00000639659 CST8O60676 142 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 SRP72O76094 671 aaKnown RBP14.54□□□□□ -0.08
SYNE2-228ENST00000639659 HBQ1P09105 142 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 TMEM253P0C7T8 217 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 RALBP11234 206 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 NAA30Q147X3 362 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-228ENST00000639659 MYBPC3Q14896 1274 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 CYP2A13Q16696 494 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 BCL7AQ4VC05 210 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 DCAF10Q5QP82 559 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 BZW1Q7L1Q6 419 aaKnown RBP14.54□□□□□ -0.08
SYNE2-228ENST00000639659 LUZP1Q86V48 1076 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 ZNF567Q8N184 647 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 OR52E1Q8NGJ3 308 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 TM9SF4Q92544 642 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 INPP5DQ92835 1189 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 TRAPPC9Q96Q05 1148 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 APOL2Q9BQE5 337 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 CCM2Q9BSQ5 444 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 ACTR10Q9NZ32 417 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 IFT80Q9P2H3 777 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-228ENST00000639659 NENFQ9UMX5 172 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 CDYLQ9Y232 598 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 NTNG1Q9Y2I2 539 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 CROCCQ5TZA2 2017 aa14.54□□□□□ -0.08
SYNE2-228ENST00000639659 C2orf81A6NN90 581 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 C2orf74A8MZ97 194 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 SPOPO43791 374 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 AKR1B10O60218 316 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 ALOX12BO75342 701 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 OR2B3O76000 313 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 AGTP01019 485 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 ITGA3P26006 1051 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 PBX1P40424 430 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 MPP3Q13368 585 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 TFDP2Q14188 446 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 IQCB1Q15051 598 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 SLC18A3Q16572 532 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 SPOCD1Q6ZMY3 1216 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 CUZD1Q86UP6 607 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 AMIGO1Q86WK6 493 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 DTX3LQ8TDB6 740 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 UBE2Q2Q8WVN8 375 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 CNDP1Q96KN2 507 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 IP6K3Q96PC2 410 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 FCRL5Q96RD9 977 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 DPH2Q9BQC3 489 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 DHRS4Q9BTZ2 278 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 SPRTNQ9H040 489 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 COG4Q9H9E3 785 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 ZBTB20Q9HC78 741 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 AGPAT4Q9NRZ5 378 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 TXLNGQ9NUQ3 528 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 P4HTMQ9NXG6 502 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 DDX56Q9NY93 547 aaKnown RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 DHCR7Q9UBM7 475 aaKnown RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 OSGIN2Q9Y236 505 aa14.53□□□□□ -0.08
SYNE2-228ENST00000639659 MDC1Q14676 2089 aaKnown RBP14.53□□□□□ -0.08
SYNE2-228ENST00000639659 KLHL33A6NCF5 533 aa14.52□□□□□ -0.09
SYNE2-228ENST00000639659 CFAP99D6REC4 459 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms