RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SMAD1Q15797 465 aaKnown RBP11.81□□□□□ -0.52
CAPN3-221ENST00000638141 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 BRAT1Q6PJG6 821 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 SPATA19Q7Z5L4 167 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 NECAB2Q7Z6G3 386 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 DNAAF3Q8N9W5 541 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 FAM181AQ8N9Y4 354 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 PDXPQ96GD0 296 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 FRMD6Q96NE9 622 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 LGMNQ99538 433 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 MAGIXQ9H6Y5 334 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 C14orf119Q9NWQ9 140 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 TAS2R7Q9NYW3 318 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 BTRCQ9Y297 605 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 KLK4Q9Y5K2 254 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 NCAM2O15394 837 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 STAU1O95793 577 aaKnown RBP11.81□□□□□ -0.52
CAPN3-221ENST00000638141 ITGB3P05106 788 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 IL1RNP18510 177 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-221ENST00000638141 KCNC1P48547 511 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 SCNN1GP51170 649 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 GTF2A2P52657 109 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 RAB25P57735 213 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 CD83Q01151 205 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 HYAL2Q12891 473 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 GNA13Q14344 377 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 DGLUCYQ7Z3D6 616 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 GPAT4Q86UL3 456 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 CEP97Q8IW35 865 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 OR8H2Q8N162 312 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.52
CAPN3-221ENST00000638141 TRNT1Q96Q11 434 aaKnown RBP11.81□□□□□ -0.52
CAPN3-221ENST00000638141 ACOX2Q99424 681 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 VAT1Q99536 393 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 TMEM245Q9H330 911 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 RNF121Q9H920 327 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 KLHL20Q9Y2M5 609 aa11.81□□□□□ -0.52
CAPN3-221ENST00000638141 B4DXG7 233 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 H0YC42 278 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 I3L521 148 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 UBFD1O14562 309 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 FAM20BO75063 409 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 SEC22BO75396 215 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 ZNF254O75437 659 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 TSPAN12O95859 305 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 AHSGP02765 367 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 IFI30P13284 250 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 CD72P21854 359 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 AVPR1AP37288 418 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 ZFP36L2P47974 494 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 SCN1BQ07699 218 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 GBX1Q14549 363 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 INTS6LQ5JSJ4 861 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 LAIR1Q6GTX8 287 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 SPESP1Q6UW49 350 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 PID1Q7Z2X4 250 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 ADGRG3Q86Y34 549 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 ACER1Q8TDN7 264 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 TESCQ96BS2 214 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 TSPAN17Q96FV3 270 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 HYLS1Q96M11 299 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 DCLRE1CQ96SD1 692 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 TMEM168Q9H0V1 697 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 SPNS1Q9H2V7 528 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 FARSBQ9NSD9 589 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 KLHL8Q9P2G9 620 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 AGO1Q9UL18 857 aaKnown RBP11.8□□□□□ -0.52
CAPN3-221ENST00000638141 MFHAS1Q9Y4C4 1052 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 GJA3Q9Y6H8 435 aa11.8□□□□□ -0.52
CAPN3-221ENST00000638141 NEMP2A6NFY4 417 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 SGTAO43765 313 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ATP6AP2O75787 350 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 EDN1P05305 212 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PFKMP08237 780 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PRR35P0CG20 571 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 TNNI3P19429 210 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 MSH3P20585 1137 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CAP2P40123 477 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CDH17Q12864 832 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 SLC14A2Q15849 920 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms