RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 IL17BQ9UHF5 180 aa18.45■□□□□ 0.54
CLN6-221ENST00000637494 ANAPC5Q9UJX4 755 aa18.45■□□□□ 0.54
CLN6-221ENST00000637494 RIMKLBQ9ULI2 386 aa18.45■□□□□ 0.54
CLN6-221ENST00000637494 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
CLN6-221ENST00000637494 BAHCC1Q9P281 2608 aa18.45■□□□□ 0.54
CLN6-221ENST00000637494 CCDC162PA2VCL2 907 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 AP3B1O00203 1094 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 KATNA1O75449 491 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 PSMA3P25788 255 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 ARCN1P48444 511 aaKnown RBP18.44■□□□□ 0.54
CLN6-221ENST00000637494 KPNA2P52292 529 aaKnown RBP18.44■□□□□ 0.54
CLN6-221ENST00000637494 KCNAB2Q13303 367 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 KCNAB1Q14722 419 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 FASTKD1Q53R41 847 aaKnown RBP18.44■□□□□ 0.54
CLN6-221ENST00000637494 TSTD2Q5T7W7 516 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 PACS1Q6VY07 963 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 ZNF662Q6ZS27 426 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 TMEM126BQ8IUX1 230 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 OR6P1Q8NGX9 317 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 APOBEC4Q8WW27 367 aaKnown RBP18.44■□□□□ 0.54
CLN6-221ENST00000637494 HDAC10Q969S8 669 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 RNF31Q96EP0 1072 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 TFB2MQ9H5Q4 396 aaKnown RBP18.44■□□□□ 0.54
CLN6-221ENST00000637494 C1GALT1Q9NS00 363 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 KCND1Q9NSA2 647 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 TUBD1Q9UJT1 453 aa18.44■□□□□ 0.54
CLN6-221ENST00000637494 ATMQ13315 3056 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 OR51F1A6NGY5 319 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 C2orf74A8MZ97 194 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 CPNE3O75131 537 aaKnown RBP18.43■□□□□ 0.54
CLN6-221ENST00000637494 FOXN2P32314 431 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 PREPP48147 710 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 DEFB109BQ30KR1 87 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 AARS2Q5JTZ9 985 aaKnown RBP18.43■□□□□ 0.54
CLN6-221ENST00000637494 PWWP2BQ6NUJ5 590 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 AMIGO1Q86WK6 493 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 PHC3Q8NDX5 983 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 OR52E1Q8NGJ3 308 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 OR4L1Q8NH43 312 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 SEC14L1Q92503 715 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 HGH1Q9BTY7 390 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 SYTL2Q9HCH5 934 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 LHX9Q9NQ69 397 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 CASS4Q9NQ75 786 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 HOMER3Q9NSC5 361 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 POLG2Q9UHN1 485 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 POMT2Q9UKY4 750 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 ASF1AQ9Y294 204 aa18.43■□□□□ 0.54
CLN6-221ENST00000637494 DRG1Q9Y295 367 aaKnown RBP18.43■□□□□ 0.54
CLN6-221ENST00000637494 SMG1Q96Q15 3661 aaKnown RBP18.43■□□□□ 0.54
CLN6-221ENST00000637494 C21orf140B9A014 251 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 SCRG1O75711 98 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 GOT2P00505 430 aaKnown RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 ETS1P14921 441 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 PDHA2P29803 388 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 BASP1P80723 227 aaKnown RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 BOP1Q14137 746 aaKnown RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 BRD3Q15059 726 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 GPR19Q15760 415 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 DRICH1Q6PGQ1 229 aaPredicted RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 LRRC8AQ8IWT6 810 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 OR13J1Q8NGT2 312 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 PEX13Q92968 403 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 BTRCQ9Y297 605 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 TCAF1Q9Y4C2 921 aa18.42■□□□□ 0.54
CLN6-221ENST00000637494 MRPS18BQ9Y676 258 aaKnown RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 FASNP49327 2511 aaKnown RBP18.42■□□□□ 0.54
CLN6-221ENST00000637494 KALRNO60229 2985 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 SLC9B1P1A6NJY1 282 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 TIAF1O95411 115 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 FGGP02679 453 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 NTRK1P04629 796 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 KLK3P07288 261 aaPredicted RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 ITGB6P18564 788 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 OAS2P29728 719 aaKnown RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 PRDX3P30048 256 aaKnown RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 RPS15P62841 145 aaKnown RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 PRKG2Q13237 762 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 DNASE1L3Q13609 305 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 ERV3-1Q14264 604 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 ZNF658BQ4V348 819 aaPredicted RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 PCID2Q5JVF3 399 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 ATG14Q6ZNE5 492 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 TBC1D21Q8IYX1 336 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 N4BP2L2Q92802 583 aaPredicted RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 SLC7A5P2Q9GIP4 190 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 EIF2B3Q9NR50 452 aaKnown RBP18.41■□□□□ 0.54
CLN6-221ENST00000637494 LATS2Q9NRM7 1088 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 POLHQ9Y253 713 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 PCDHGA6Q9Y5G7 932 aa18.41■□□□□ 0.54
CLN6-221ENST00000637494 PIPSLA2A3N6 862 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 BTN3A1O00481 513 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 CEP104O60308 925 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 CREG1O75629 220 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 SHMT2P34897 504 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 RPL22P35268 128 aaKnown RBP18.4■□□□□ 0.54
CLN6-221ENST00000637494 GRIA1P42261 906 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 ACVR1Q04771 509 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 PRUNE1Q86TP1 453 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms