RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 H3BNC9 293 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 INMTO95050 263 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 CDH1P12830 882 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 PFKLP17858 780 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 CCNA2P20248 432 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 CRY1Q16526 586 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 FUT10Q6P4F1 479 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 BPIFB1Q8TDL5 484 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 SOCS4Q8WXH5 440 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 PLEKHA8Q96JA3 519 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC22A12Q96S37 553 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 ADGRE3Q9BY15 652 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 TBC1D23Q9NUY8 699 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC25A37Q9NYZ2 338 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 PIKFYVEQ9Y2I7 2098 aa13.77□□□□□ -0.2
CACNA1A-228ENST00000636610 STX16O14662 325 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TAPBPO15533 448 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TBL1XO60907 577 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 HTR1EP28566 365 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 FMO3P31513 532 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 ALDH3A2P51648 485 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 PDCD4Q53EL6 469 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 C8orf59Q8N0T1 100 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF382Q96SR6 550 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 INPP5KQ9BT40 448 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 POPDC3Q9HBV1 291 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 COMMD8Q9NX08 183 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 ZIM2Q9NZV7 527 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 PATJQ8NI35 1801 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 SH3PXD2BA1X283 911 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 K7EPI3 171 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 KDELR3O43731 214 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 MTX2O75431 263 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 CD160O95971 181 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 BCL10O95999 233 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 GLUD1P00367 558 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 SERPINA1P01009 418 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 IGLV3-27P01718 113 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 RAP2AP10114 183 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TACR1P25103 407 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 PLA2G16P53816 162 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 IL5RAQ01344 420 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 CD47Q08722 323 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TRAF3Q13114 568 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 NR1D2Q14995 579 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 RIMKLAQ8IXN7 391 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 RGL4Q8IZJ4 473 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 NETO1Q8TDF5 533 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 CD320Q9NPF0 282 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 FNIP2Q9P278 1114 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 ST14Q9Y5Y6 855 aa13.77□□□□□ -0.21
CACNA1A-228ENST00000636610 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 ULK1O75385 1050 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 STC2O76061 302 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 CR2P20023 1033 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 CA8P35219 290 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 HLCSP50747 726 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 CDH4P55283 916 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 ZXDBP98169 803 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 FOXM1Q08050 763 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 DDX39BQ13838 428 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 SPCS2Q15005 226 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 THAP5Q7Z6K1 395 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 KCNJ9Q92806 393 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 UBE2FQ969M7 185 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 EBPLQ9BY08 206 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 FAM118AQ9NWS6 357 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 DLGAP4Q9Y2H0 992 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 TBKBP1A7MCY6 615 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 hCG_2039718K7EN88 272 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 CXCR6O00574 342 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 ATP6V1G1O75348 118 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 PRSS23O95084 383 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 PGRP06401 933 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 HOXB8P17481 243 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 GGT1P19440 569 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 MAP2K4P45985 399 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 PWP1Q13610 501 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 XAF1Q6GPH4 301 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 MSRB3Q8IXL7 192 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 MYLIPQ8WY64 445 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms