RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NEK10Q6ZWH5 1172 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 GKN2Q86XP6 184 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 VRK3Q8IV63 474 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 SPNS2Q8IVW8 549 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 NKAPQ8N5F7 415 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 EID2Q8N6I1 236 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 UBXN10Q96LJ8 280 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 TAAR2Q9P1P5 351 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 TBC1D29Q9UFV1 150 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 TLK1Q9UKI8 766 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 ACOT9Q9Y305 439 aa19.41■□□□□ 0.7
PDLIM2-221ENST00000622702 A0A087X1B8 175 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 A0A1W2PPM1 405 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 CNOT1A5YKK6 2376 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 GOLGA6L10A6NI86 522 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 ATP8B1O43520 1251 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 CBFA2T3O75081 653 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 CEACAM1P13688 526 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 PDHA2P29803 388 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 TCEA2Q15560 299 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 PPM1JQ5JR12 505 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 LVRNQ6Q4G3 990 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 TRABD2AQ86V40 505 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 CABS1Q96KC9 395 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 TMBIM4Q9HC24 238 aa19.4■□□□□ 0.7
PDLIM2-221ENST00000622702 YY2O15391 372 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 SLC35G4P0C7Q5 338 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 MPC1LP0DKB6 136 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 CAPRIN2Q6IMN6 1127 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 SH2D5Q6ZV89 423 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 TBC1D1Q86TI0 1168 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 PDZD3Q86UT5 571 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 EEF1AKMT1Q8WVE0 214 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 ANKRD49Q8WVL7 239 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 LINGO1Q96FE5 620 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 ACBD3Q9H3P7 528 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 PRDM8Q9NQV8 689 aa19.39■□□□□ 0.69
PDLIM2-221ENST00000622702 NEMP2A6NFY4 417 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 PDZK1P1A8MUH7 402 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 FFAR2O15552 330 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 SNX2O60749 519 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 ANXA6P08133 673 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 COL6A2P12110 1019 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 F3P13726 295 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 BRAFP15056 766 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 RPL10P27635 214 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 ACADLP28330 430 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 CCNFP41002 786 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 TRIP6Q15654 476 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 CYHR1Q6ZMK1 362 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 BAHD1Q8TBE0 780 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 RMDN2Q96LZ7 410 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 SH3GL2Q99962 352 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 DERL2Q9GZP9 239 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 WWP1Q9H0M0 922 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 STMN4Q9H169 189 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 VPS11Q9H270 941 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 CENPHQ9H3R5 247 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 SENP1Q9P0U3 644 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 DOLKQ9UPQ8 538 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 WDR37Q9Y2I8 494 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 ARID1BQ8NFD5 2236 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 PCNX2A6NKB5 2137 aa19.38■□□□□ 0.69
PDLIM2-221ENST00000622702 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 FOXO6A8MYZ6 492 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 EML2O95834 649 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 CCDC166P0CW27 439 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 PYGBP11216 843 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 SEPT7Q16181 437 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 PIWIL4Q7Z3Z4 852 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 CLEC14AQ86T13 490 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 LCA5Q86VQ0 697 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 CENPLQ8N0S6 344 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 MYO1HQ8N1T3 1032 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 FAM46DQ8NEK8 389 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 SPDYE1Q8NFV5 336 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 ZBTB9Q96C00 473 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 CDC6Q99741 560 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 PSMD13Q9UNM6 376 aa19.37■□□□□ 0.69
PDLIM2-221ENST00000622702 OR5K4A6NMS3 321 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 IFRD1O00458 451 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 OPA1O60313 960 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 MATN4O95460 622 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 LTA4HP09960 611 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 GIMD1P0DJR0 217 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 SLC2A4P14672 509 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 GMPRP36959 345 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 HALP42357 657 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 MAPK9P45984 424 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 ATP6V0D1P61421 351 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 IRF9Q00978 393 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 SLC18A2Q05940 514 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 DLG1Q12959 904 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 CSHL1Q14406 222 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 CLCA4Q14CN2 919 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 IYDQ6PHW0 289 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 RASGRP3Q8IV61 690 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 SRRM1Q8IYB3 904 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 KCTD4Q8WVF5 259 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 IGSF5Q9NSI5 407 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms