RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GSTA4O15217 222 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 GREM1O60565 184 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 SOCS5O75159 536 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC25A14O95258 325 aaPredicted RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ATE1O95260 518 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CLIC3O95833 236 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRBC1P01850 177 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALPIP09923 528 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CBSLP0DN79 551 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CTPS1P17812 591 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ACRV1P26436 265 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 SHMT2P34897 504 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CA5AP35218 305 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CBSP35520 551 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CSKP41240 450 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 GNPDA1P46926 289 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 NRIP1P48552 1158 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 PIK3CGP48736 1102 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 GZMMP51124 257 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 MTPNP58546 118 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 RPL38P63173 70 aaKnown RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 NFATC2Q13469 925 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 TOP3AQ13472 1001 aaPredicted RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 LRIF1Q5T3J3 769 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ATXN7L2Q5T6C5 722 aaPredicted RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CACHD1Q5VU97 1274 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 BROXQ5VW32 411 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 LHX8Q68G74 356 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 GRAMD4Q6IC98 578 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 Q6ZNB5 142 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 KCTD8Q6ZWB6 473 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 THAP5Q7Z6K1 395 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 MICU2Q8IYU8 434 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 OFCC1Q8IZS5 231 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 DCBLD1Q8N8Z6 715 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 OR2T12Q8NG77 320 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 HDAC2Q92769 488 aaKnown RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 RHBDF1Q96CC6 855 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CLSTN3Q9BQT9 956 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 OSBPL10Q9BXB5 764 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 VN1R3Q9BXE9 311 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 DPY30Q9C005 99 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 PIF1Q9H611 641 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ASB8Q9H765 288 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CARS2Q9HA77 564 aaKnown RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZFYVE1Q9HBF4 777 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 LRTM1Q9HBL6 345 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 PREBQ9HCU5 417 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 WWOXQ9NZC7 414 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 VAPAQ9P0L0 249 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 SRRDQ9UH36 339 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 CDC14AQ9UNH5 594 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 YIPF1Q9Y548 306 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ANGPTL3Q9Y5C1 460 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 ANKRD12Q6UB98 2062 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 PLXNB3Q9ULL4 1909 aa9.43□□□□□ -0.9
IGHV3-54-201ENST00000622166 OBSL1O75147 1896 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 A0A096LPI6 279 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 A0A0U1RQS6 177 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CXorf51AA0A1B0GTR3 108 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ELOVL7A1L3X0 281 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 C2orf78A6NCI8 922 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 LOC730098B7Z3J9 87 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 H3BMQ9 156 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CXCR6O00574 342 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ABCB7O75027 752 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 ERN1O75460 977 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SEC14L2O76054 403 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 PRAMEF1O95521 474 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MT-ND1P03886 318 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 RETP07949 1114 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MBL2P11226 248 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 PRPS2P11908 318 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 HOXB9P17482 250 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 RPL17P18621 184 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 PRPH2P23942 346 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 NFKBIAP25963 317 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 GGT5P36269 586 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 POLR2IP36954 125 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SPAM1P38567 509 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MTHFRP42898 656 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TMBIM6P55061 237 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CLDN8P56748 225 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 RAB15P59190 212 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 GABARAPL2P60520 117 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SP3Q02447 781 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 TWF1Q12792 350 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 PLD1Q13393 1074 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 CHRNA6Q15825 494 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 NKG7Q16617 165 aa9.42□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAPKAPK3Q16644 382 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms