RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ZNF224Q9NZL3 707 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 GMPR2Q9P2T1 348 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ANKRD6Q9Y2G4 727 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ACTL7AQ9Y615 435 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 A0A0A0MRY4 1105 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 OR6C65A6NJZ3 312 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 FZD9O00144 591 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ARPC2O15144 300 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 RGS5O15539 181 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 HBP1O60381 514 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 SNAPINO95295 136 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 MPOP05164 745 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ALPLP05186 524 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF286BP0CG31 522 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ERVK-10P10266 1014 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF250P15622 560 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CHRM3P20309 590 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 MSH3P20585 1137 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 PSMB4P28070 264 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ADORA2BP29275 332 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 OXTRP30559 389 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TGFBR2P37173 567 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 RECQLP46063 649 aaPredicted RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 IL1RL1Q01638 556 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 FOXM1Q08050 763 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 KCNC3Q14003 757 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TAB1Q15750 504 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 LIPMQ5VYY2 423 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 USP50Q70EL3 339 aaPredicted RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 DPP9Q86TI2 863 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CCDC190Q86UF4 302 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 PHC2Q8IXK0 858 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 RBFAQ8N0V3 343 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CLEC4FQ8N1N0 589 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ST8SIA4Q92187 359 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 C18orf25Q96B23 403 aaPredicted RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 SPATA13Q96N96 652 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF416Q9BWM5 594 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 NFKBIZQ9BYH8 718 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CATSPERBQ9H7T0 1116 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 CCNB1IP1Q9NPC3 277 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ITM2CQ9NQX7 267 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ACSS2Q9NR19 701 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TRMT13Q9NUP7 481 aaKnown RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 OXSMQ9NWU1 459 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 BFARQ9NZS9 450 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 NUFIP1Q9UHK0 495 aaKnown RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TRHDEQ9UKU6 1024 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 ACSL5Q9ULC5 683 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 AKT3Q9Y243 479 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TNPO3Q9Y5L0 923 aaKnown RBP7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 HRH3Q9Y5N1 445 aa7.38□□□□□ -1.23
TRIM49B-202ENST00000622138 TCRBV5S2A0A599 114 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 F8W036 122 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 LINC01387J3KSC0 135 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 BTN3A3O00478 584 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 NME4O00746 187 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 SDHDO14521 159 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 KPNA5O15131 536 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 GMDSO60547 372 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 PRSS23O95084 383 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 LDOC1O95751 146 aaPredicted RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 TSPAN12O95859 305 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 APOC1P02654 83 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 PROS1P07225 676 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CHRNGP07510 517 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 TXNP10599 105 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 LCP1P13796 627 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 TFEBP19484 476 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 TIE1P35590 1138 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 HNF1BP35680 557 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 RAB25P57735 213 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CD83Q01151 205 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 FPGSQ05932 587 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CD47Q08722 323 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 MEP1AQ16819 746 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CTU2Q2VPK5 515 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM214AQ32MH5 1076 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 Q3ZCU0 254 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 ARMCX4Q5H9R4 360 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 VARS2Q5ST30 1063 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 HEATR6Q6AI08 1181 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 SMYD5Q6GMV2 418 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 CES5AQ6NT32 575 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 RANBP10Q6VN20 620 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM131BQ86XD5 332 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 PTRH1Q86Y79 214 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 SPPL2CQ8IUH8 684 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 PLD6Q8N2A8 252 aaKnown RBP7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 VWA5B2Q8N398 1253 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 COLGALT1Q8NBJ5 622 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 HMGCLL1Q8TB92 370 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 TEX47Q8TBZ9 253 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 AGR3Q8TD06 166 aa7.37□□□□□ -1.23
TRIM49B-202ENST00000622138 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms