RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 SIX3O95343 332 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 CD1DP15813 335 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 CSNK1DP48730 415 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 UBAP2LQ14157 1087 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 DBX2Q6ZNG2 339 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 SERPINA9Q86WD7 417 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 AHI1Q8N157 1196 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 EEF1AKMT1Q8WVE0 214 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 ESAMQ96AP7 390 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 ECHDC3Q96DC8 303 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 TSPAN17Q96FV3 270 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 KCNK4Q9NYG8 393 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 FBXO10Q9UK96 956 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 SARDHQ9UL12 918 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 COQ6Q9Y2Z9 468 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 WASF2Q9Y6W5 498 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 BRWD1Q9NSI6 2320 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 NCF1BA6NI72 391 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 SYCE1LA8MT33 242 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 NCF1CA8MVU1 366 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 H7C0S8 307 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 UBXN8O00124 270 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 ZCCHC18P0CG32 403 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 NCF1P14598 390 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 PKMP14618 531 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 FCARP24071 287 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 CPA2P48052 419 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 IDH3AP50213 366 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 BCAP31P51572 246 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 CDH13P55290 713 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 NFATC2Q13469 925 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 SLC9B1Q4ZJI4 515 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 RALGPS1Q5JS13 557 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 GDPD4Q6W3E5 623 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 KIAA0907Q7Z7F0 614 aaPredicted RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 SYTL1Q8IYJ3 562 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 PCDH20Q8N6Y1 951 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 ISG20Q96AZ6 181 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 COX4I2Q96KJ9 171 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 GDF15Q99988 308 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 GHITMQ9H3K2 345 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 INTS10Q9NVR2 710 aaKnown RBP11.19□□□□□ -0.62
TP53-226ENST00000620739 TAS2R13Q9NYV9 303 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 MARK1Q9P0L2 795 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 KCNN3Q9UGI6 736 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
TP53-226ENST00000620739 COL6A3P12111 3177 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 PLK4O00444 970 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 NEMP1O14524 444 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 UNC5CO95185 931 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 TTPAP49638 278 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 TUBB3Q13509 450 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 ACAP2Q15057 778 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 TSNQ15631 228 aaKnown RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 KCNJ8Q15842 424 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 CPNE9Q8IYJ1 553 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 CPSF7Q8N684 471 aaKnown RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 LKAAEAR1Q8TD35 194 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 KLHL29Q96CT2 875 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 KXD1Q9BQD3 176 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 FAM83CQ9BQN1 747 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 DDX18Q9NVP1 670 aaKnown RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 NCKIPSDQ9NZQ3 722 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 TMEM5Q9Y2B1 443 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 SNX5Q9Y5X3 404 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 GLYATL1P3A0A0U1RQE8 302 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 SLC9A3R1O14745 358 aaPredicted RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 MTX2O75431 263 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 IPO13O94829 963 aaKnown RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 APOA4P06727 396 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 LYNP07948 512 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 UBTFL6P0CB48 400 aaPredicted RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 MTHFD2P13995 350 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 ZNF3P17036 446 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 M6PRP20645 277 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 MAPK8P45983 427 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 RECQLP46063 649 aaPredicted RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 CACNG1Q06432 222 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 PFKFB4Q16877 469 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 VITQ6UXI7 678 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 TPRG1Q6ZUI0 275 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 GPR149Q86SP6 731 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 SLC7A6OSQ96CW6 309 aaPredicted RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 OR52B2Q96RD2 323 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
TP53-226ENST00000620739 ARHGEF3Q9NR81 526 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 NMRK1Q9NWW6 199 aa11.18□□□□□ -0.62
TP53-226ENST00000620739 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms