RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MEN1O00255 615 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 LIN7AO14910 233 aaPredicted RBP11.58□□□□□ -0.56
UPF3B-204ENST00000619445 LDB2O43679 373 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 SGTAO43765 313 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 KLHL41O60662 606 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 FTH1P02794 183 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 POLR2CP19387 275 aaPredicted RBP11.58□□□□□ -0.56
UPF3B-204ENST00000619445 CYP2A7P20853 494 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 ACRV1P26436 265 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 VARSP26640 1264 aaKnown RBP11.58□□□□□ -0.56
UPF3B-204ENST00000619445 MC4RP32245 332 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 NSG1P42857 185 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PREPP48147 710 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 CD97P48960 835 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PGDP52209 483 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 VAV2P52735 878 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 RRADP55042 308 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 CACNG1Q06432 222 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 MSLNQ13421 630 aaPredicted RBP11.58□□□□□ -0.56
UPF3B-204ENST00000619445 ITIH4Q14624 930 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PTPRCAPQ14761 206 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 ZRANB3Q5FWF4 1079 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 COLEC12Q5KU26 742 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 LYPLAL1Q5VWZ2 237 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 DENND5AQ6IQ26 1287 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PEX26Q7Z412 305 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
UPF3B-204ENST00000619445 OR13C4Q8NGS5 318 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 IP6K3Q96PC2 410 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 FERD3LQ96RJ6 166 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 NLNQ9BYT8 704 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PITPNM3Q9BZ71 974 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 SLC7A5P2Q9GIP4 190 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 OR52A5Q9H2C5 316 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 ACSS2Q9NR19 701 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 FAM8A1Q9UBU6 413 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 POLG2Q9UHN1 485 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 SNX7Q9UNH6 387 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 PADI2Q9Y2J8 665 aa11.58□□□□□ -0.56
UPF3B-204ENST00000619445 C9J4A7 227 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 IGHEP01854 428 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 FURINP09958 794 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 PRDX3P30048 256 aaKnown RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 SHMT2P34897 504 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 CA5AP35218 305 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 PPARGP37231 505 aaPredicted RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 GPR19Q15760 415 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 KCTD11Q693B1 232 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 DUS1LQ6P1R4 473 aaKnown RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 TAS2R42Q7RTR8 314 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 KIAA1328Q86T90 577 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 SERPINA9Q86WD7 417 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 AMIGO1Q86WK6 493 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 GPR135Q8IZ08 494 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 DSELQ8IZU8 1212 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 TMEM102Q8N9M5 508 aaPredicted RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 LRRC57Q8N9N7 239 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 CLIP3Q96DZ5 547 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 SLC25A23Q9BV35 468 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 CHRNA10Q9GZZ6 450 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 ACTR5Q9H9F9 607 aaPredicted RBP11.57□□□□□ -0.56
UPF3B-204ENST00000619445 ZNF451Q9Y4E5 1061 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 AP1M2Q9Y6Q5 423 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 MED13Q9UHV7 2174 aa11.57□□□□□ -0.56
UPF3B-204ENST00000619445 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 SLC9B1P1A6NJY1 282 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 E7EQ34 232 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 AP2A1O95782 977 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 AGXTP21549 392 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 PSMA3P25788 255 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 STIP1P31948 543 aaKnown RBP11.56□□□□□ -0.56
UPF3B-204ENST00000619445 ITGA1P56199 1179 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 TMPRSS15P98073 1019 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 KIF5AQ12840 1032 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 GPS2Q13227 327 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 BOP1Q14137 746 aaKnown RBP11.56□□□□□ -0.56
UPF3B-204ENST00000619445 PAPD7Q5XG87 772 aaKnown RBP11.56□□□□□ -0.56
UPF3B-204ENST00000619445 PACS1Q6VY07 963 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 MED25Q71SY5 747 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 RAB43Q86YS6 212 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 FAM26EQ8N5C1 309 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 ALG3Q92685 438 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 N4BP2L2Q92802 583 aaPredicted RBP11.56□□□□□ -0.56
UPF3B-204ENST00000619445 MIB2Q96AX9 1013 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 CDKN2AIPNLQ96HQ2 116 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 DNAJC1Q96KC8 554 aaKnown RBP11.56□□□□□ -0.56
UPF3B-204ENST00000619445 TSSK1BQ9BXA7 367 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 TLR10Q9BXR5 811 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 ING2Q9H160 280 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 CHST8Q9H2A9 424 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 C10orf88Q9H8K7 445 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 OR6C2Q9NZP2 312 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 ANKMY1Q9P2S6 941 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 TCFL5Q9UL49 500 aa11.56□□□□□ -0.56
UPF3B-204ENST00000619445 TFR2Q9UP52 801 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms