RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 IFT81Q8WYA0 676 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ART4Q93070 314 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 FAM46AQ96IP4 442 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 RSRC1Q96IZ7 334 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 DNAJC1Q96KC8 554 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 FANCD2OSQ96PS1 177 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 SLC13A1Q9BZW2 595 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 SLC25A51Q9H1U9 297 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 PPT2Q9UMR5 302 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 RBMX2Q9Y388 322 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ALG6Q9Y672 507 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 COL6A3P12111 3177 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 C5orf60A6NFR6 353 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 TLCD2A6NGC4 264 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 WNT9AO14904 365 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 KMOO15229 486 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 YY2O15391 372 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 INSIG1O15503 277 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 KDM1AO60341 852 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 LRIG2O94898 1065 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 PDGFRAP16234 1089 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 HLA-DPA1P20036 260 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 IVDP26440 423 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ART3Q13508 389 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ARHGAP19Q14CB8 494 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 CNGA3Q16281 694 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ALFQ53S48 1182 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 C6orf183Q5T699 404 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 AGBL2Q5U5Z8 902 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 CCDC70Q6NSX1 233 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 KDELC1Q6UW63 502 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 PEX26Q7Z412 305 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 DAAM2Q86T65 1068 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 NLGN4XQ8N0W4 816 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 EID3Q8N140 333 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 TTC30BQ8N4P2 665 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 POGLUT1Q8NBL1 392 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 NLGN4YQ8NFZ3 816 aaPredicted RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 MDM1Q8TC05 714 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 AGAP11Q8TF27 550 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 KRT35Q92764 455 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 HAS2Q92819 552 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ATP6V1G3Q96LB4 118 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 GFM1Q96RP9 751 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 NACA2Q9H009 215 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 NOD2Q9HC29 1040 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 UBE2TQ9NPD8 197 aaPredicted RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 APOBEC3BQ9UH17 382 aaKnown RBP5.3□□□□□ -1.56
CBWD3-215ENST00000619322 SFMBT1Q9UHJ3 866 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 ZNF711Q9Y462 761 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 LOXL2Q9Y4K0 774 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 RNF215Q9Y6U7 377 aa5.3□□□□□ -1.56
CBWD3-215ENST00000619322 MUC6Q6W4X9 2439 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 KCNE1BA0A087WTH5 132 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 HMGB1P1B2RPK0 211 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 RAD51BO15315 384 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PRICKLE3O43900 615 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 MMEP08473 750 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 FOSL1P15407 271 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 MARCKSL1P49006 195 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 RPS24P62847 133 aaKnown RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 LRRC23Q53EV4 343 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 LACTB2Q53H82 288 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 GARNL3Q5VVW2 1013 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 TLDC1Q6P9B6 456 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 RNF44Q7L0R7 432 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PLXDC1Q8IUK5 500 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 KATNAL2Q8IYT4 538 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ARFGAP1Q8N6T3 406 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 DYDC1Q8WWB3 177 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 OIT3Q8WWZ8 545 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 DLG3Q92796 817 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 CMKLR1Q99788 373 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 TRIM39Q9HCM9 518 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 FAM114A2Q9NRY5 505 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 DDIT4Q9NX09 232 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 GALNT8Q9NY28 637 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 EURLQ9NYK6 297 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 CHMP2BQ9UQN3 213 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 NCKAP5O14513 1909 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 MASP2O00187 686 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 TTI1O43156 1089 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 HNRNPRO43390 633 aaKnown RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PF4P02776 101 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 KRT7P08729 469 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 STSP08842 583 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PRLHRP49683 370 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 KCNJ2P63252 427 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ODF2Q5BJF6 829 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 FDX2Q6P4F2 183 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 KLHL35Q6PF15 583 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 C16orf87Q6PH81 154 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 C6orf89Q6UWU4 347 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 CCDC121Q6ZUS5 278 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 YTHDF3Q7Z739 585 aaKnown RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ZBTB46Q86UZ6 589 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 NKAPQ8N5F7 415 aaKnown RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 NAT16Q8N8M0 369 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 LMX1AQ8TE12 382 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms