RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 JCHAINP01591 159 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 CDH1P12830 882 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 IL32P24001 234 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 COPZ1P61923 177 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PRKAA1Q13131 559 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 SERINC3Q13530 473 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 DHCR24Q15392 516 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 IRAK1BP1Q5VVH5 260 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 TIGD7Q6NT04 549 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 KIAA0408Q6ZU52 694 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 RALGPS2Q86X27 583 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 LACC1Q8IV20 430 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PGAM4Q8N0Y7 254 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 RP9Q8TA86 221 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ELSPBP1Q96BH3 223 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 RHOJQ9H4E5 214 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 RUVBL2Q9Y230 463 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 CHD5Q8TDI0 1954 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 SLC22A2O15244 555 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PHGDHO43175 533 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 KRT8P05787 483 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 CCR10P46092 362 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 CSRP3P50461 194 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PRAMEP78395 509 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF33AQ06730 810 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 SMAD4Q13485 552 aaKnown RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 DSELQ8IZU8 1212 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-219ENST00000615335 KIFC1Q9BW19 673 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 VTI1BQ9UEU0 232 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 ENPP5Q9UJA9 477 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PACSIN3Q9UKS6 424 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 SLCO1B7G3V0H7 640 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CBX4O00257 560 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 PLOD2O00469 737 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 SNPHO15079 494 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MATN3O15232 486 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 GRID2O43424 1007 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MBTPS2O43462 519 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 NFATC1O95644 943 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ADH1CP00326 375 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CYP17A1P05093 508 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 SBK3P0C264 359 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ARSAP15289 507 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CD1EP15812 388 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 TFEBP19484 476 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ETFBP38117 255 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CSKP41240 450 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 GLRBP48167 497 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 NAGLUP54802 743 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 TNK2Q07912 1038 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 DNASE1L3Q13609 305 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 SLC12A1Q13621 1099 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 TMEM151AQ8N4L1 468 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 KCTD4Q8WVF5 259 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 KLHL32Q96NJ5 620 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 SLC29A1Q99808 456 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF229Q9UJW7 825 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 CDYLQ9Y232 598 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ISPDA4D126 451 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ACOT8O14734 319 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 POLR1CO15160 346 aaPredicted RBP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 GPC4O75487 556 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ADH5P11766 374 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ARL1P40616 181 aaPredicted RBP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MS4A2Q01362 244 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ABRAXAS1Q6UWZ7 409 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MTSS1LQ765P7 747 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms