RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 LINC00523Q86TU6 105 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 SPATA6LQ8N4H0 392 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 SPATA4Q8NEY3 305 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 DLG3Q92796 817 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 CFAP36Q96G28 342 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 NRSN2Q9GZP1 204 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 P2RY12Q9H244 342 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 IARS2Q9NSE4 1012 aaKnown RBP5.55□□□□□ -1.52
CPNE3-208ENST00000614678 CATSPERZQ9NTU4 200 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 IL17BQ9UHF5 180 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 SOX13Q9UN79 622 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 ICKQ9UPZ9 632 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 SCN3AQ9NY46 2000 aa5.55□□□□□ -1.52
CPNE3-208ENST00000614678 CXorf49A8MYA2 514 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 FAM155BO75949 473 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 S1PR4O95977 384 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 JMJD7P0C870 316 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ST6GAL1P15907 406 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PSMA3P25788 255 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ACADLP28330 430 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 DR1Q01658 176 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 EFTUD2Q15029 972 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 BCL7AQ4VC05 210 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 FASTKD1Q53R41 847 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ACSBG2Q5FVE4 666 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PDPK2PQ6A1A2 396 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TMEM71Q6P5X7 295 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SLC9B2Q86UD5 537 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 AVL9Q8NBF6 648 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PPHLN1Q8NEY8 458 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 LPGAT1Q92604 370 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 FGF11Q92914 225 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 GLMNQ92990 594 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TRAPPC9Q96Q05 1148 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CCM2Q9BSQ5 444 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 STARD5Q9NSY2 213 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 HRASLS2Q9NWW9 162 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PCM1Q15154 2024 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 MDC1Q14676 2089 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SLC5A10A0PJK1 596 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 DNALI1O14645 258 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TCEA3O75764 348 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 C9P02748 559 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TPSB2P20231 275 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 RPS18P62269 152 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ETF1P62495 437 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CXADRP78310 365 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TPSAB1Q15661 275 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CILP2Q8IUL8 1156 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 RP1L1Q8IWN7 2480 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ANP32BQ92688 251 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 TFGQ92734 400 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 OR6C1Q96RD1 312 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 LRRC1Q9BTT6 524 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 RMI1Q9H9A7 625 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 KCTD5Q9NXV2 234 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 GRHL1Q9NZI5 618 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 BFARQ9NZS9 450 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ASF1AQ9Y294 204 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CTAGE15A4D2H0 777 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SLC9B1P1A6NJY1 282 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PPFIA2O75334 1257 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PYGLP06737 847 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 FURINP09958 794 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SLC35G4P0C7Q5 338 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SSTR1P30872 391 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 MAGEA6P43360 314 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CDKN2DP55273 166 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 DMPKQ09013 629 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PTK6Q13882 451 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 LY6DQ14210 128 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 AFTPHQ6ULP2 937 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 SUSD1Q6UWL2 747 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 UNC5AQ6ZN44 842 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CTAGE6Q86UF2 777 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ADGRF3Q8IZF5 1079 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 OR4D9Q8NGE8 314 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 FLVCR1-AS1Q8TAF5 88 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 NXPE2Q96DL1 559 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 C9orf72Q96LT7 481 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 ACAT2Q9BWD1 397 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 IL22Q9GZX6 179 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 LRRC4CQ9HCJ2 640 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 EIF2B3Q9NR50 452 aaKnown RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 C20orf96Q9NUD7 363 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-208ENST00000614678 PCYOX1Q9UHG3 505 aa5.54□□□□□ -1.52
CPNE3-208ENST00000614678 CCDC187A0A096LP49 1063 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 KIR2DS5A0A0G2JLQ3 304 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 A0A0G2JNG1 304 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 GSAPA4D1B5 854 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 KIR2DS3K7RE56 304 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 SEC31AO94979 1220 aaKnown RBP5.53□□□□□ -1.52
CPNE3-208ENST00000614678 TCP1P17987 556 aaKnown RBP5.53□□□□□ -1.52
CPNE3-208ENST00000614678 CCKBRP32239 447 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 NSG1P42857 185 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 CAPZBP47756 277 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 CRYMQ14894 314 aa5.53□□□□□ -1.52
CPNE3-208ENST00000614678 KIR2DS5Q14953 304 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms