RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PIM3Q86V86 326 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ZC3HC1Q86WB0 502 aaKnown RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ZNF761Q86XN6 746 aaPredicted RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 TBC1D21Q8IYX1 336 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 PPM1NQ8N819 430 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 SIDT2Q8NBJ9 832 aaKnown RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 ACVR1CQ8NER5 493 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 INPP5DQ92835 1189 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ATXN7L3BQ96GX2 97 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ELMO2Q96JJ3 720 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 DEPDC7Q96QD5 511 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 GPR21Q99679 349 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ACSS3Q9H6R3 686 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 KIR3DX1Q9H7L2 352 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ANKZF1Q9H8Y5 726 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 POLG2Q9UHN1 485 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 CDYLQ9Y232 598 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 DHRS7Q9Y394 339 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ARID1BQ8NFD5 2236 aaPredicted RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 FAM95CA0A1B0GW59 222 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 EIF3FO00303 357 aaPredicted RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 B4GAT1O43505 415 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CPNE6O95741 557 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 JUPP14923 745 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 AMD1P17707 334 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CD9P21926 228 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 ACADLP28330 430 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 PMS2P54278 862 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CCL7P80098 99 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 INSM1Q01101 510 aaPredicted RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 ABRQ12979 859 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 KLHL38Q2WGJ6 581 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 RBM20Q5T481 1227 aaKnown RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 GRTP1Q5TC63 336 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 HES3Q5TGS1 186 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 HECTD2Q5U5R9 776 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 RAB44Q7Z6P3 723 aaPredicted RBP12.93□□□□□ -0.34
MDC1-209ENST00000613547 VRK3Q8IV63 474 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CHCHD4Q8N4Q1 142 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CFAP61Q8NHU2 1237 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 MAGEC3Q8TD91 643 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 TSPAN17Q96FV3 270 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 SMYD2Q9NRG4 433 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CLCA2Q9UQC9 943 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 VWA7Q9Y334 891 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 IKBKGQ9Y6K9 419 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 CACNA1AO00555 2505 aa12.93□□□□□ -0.34
MDC1-209ENST00000613547 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 D6RAR5 112 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 PIAS1O75925 651 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 UBXN7O94888 489 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 MT-CO3P00414 261 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 TUBBP07437 444 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 SAT1P21673 171 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CD1CP29017 333 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CCNFP41002 786 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 LIMK2P53671 638 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CDKN2DP55273 166 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 SQSTM1Q13501 440 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 GBX1Q14549 363 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 NEK10Q6ZWH5 1172 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 PLXDC1Q8IUK5 500 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 DCUN1D3Q8IWE4 304 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 CACTIN-AS1Q8N1I8 211 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 RAB42Q8N4Z0 105 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 OR5AR1Q8NGP9 310 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 OR5K2Q8NHB8 316 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 CD200R1Q8TD46 325 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 GRAMD1AQ96CP6 724 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 TMEM74Q96NL1 305 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 RBBP8Q99708 897 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 HGH1Q9BTY7 390 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 TBC1D10AQ9BXI6 508 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 FUT8Q9BYC5 575 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 GALPQ9UBC7 116 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 TDRKHQ9Y2W6 561 aaKnown RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 MED16Q9Y2X0 877 aa12.92□□□□□ -0.34
MDC1-209ENST00000613547 GOLGA4Q13439 2230 aaKnown RBP12.92□□□□□ -0.34
MDC1-209ENST00000613547 BPTFQ12830 3046 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 PRAMEF33A0A0G2JMD5 474 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 A0A1W2PQM1 296 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 MATN2O00339 956 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 C1QAP02745 245 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 PROS1P07225 676 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 INHBAP08476 426 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 ADRB1P08588 477 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms