RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 BTBD1Q9H0C5 482 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TIGARQ9NQ88 270 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 DUSP22Q9NRW4 184 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RPL36Q9Y3U8 105 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 FAM205AQ6ZU69 1335 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF780AO75290 641 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RGS9O75916 674 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RPS19P39019 145 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GMPSP49915 693 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC12A3P55017 1021 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CD81P60033 236 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PTSQ03393 145 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SGO1Q5FBB7 561 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 OVOS1Q6IE37 1185 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 EPGNQ6UW88 154 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 MACC1Q6ZN28 852 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 COMTD1Q86VU5 262 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GALNT13Q8IUC8 556 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 MCOLN2Q8IZK6 566 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 YIPF7Q8N8F6 280 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SGCDQ92629 289 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 DUS3LQ96G46 650 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF496Q96IT1 587 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM209Q96SK2 561 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PI4K2AQ9BTU6 479 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ABCB9Q9NP78 766 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 MID1IP1Q9NPA3 183 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TOPORSQ9NS56 1045 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PDP1Q9P0J1 537 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 C5P01031 1676 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 WDR81Q562E7 1941 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 LOC100130705A0A1B0GUX0 176 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 A0A1W2PQ67 120 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 FAM205CA6NFA0 338 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ENTPD6O75354 484 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GRK5P34947 590 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PSMC5P62195 406 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NKX6-1P78426 367 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CRY1Q16526 586 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 BBS1Q8NFJ9 593 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CHIAQ9BZP6 476 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC38A1Q9H2H9 487 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CHST7Q9NS84 486 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CD163L1Q9NR16 1453 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ROBO1Q9Y6N7 1651 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NUDT19A8MXV4 375 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 HLA-DMAP28067 261 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 MSTO1Q9BUK6 570 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PIF1Q9H611 641 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 WDR26Q9H7D7 661 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NRBP2Q9NSY0 501 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 A8MX80 341 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NEDD8-MDP1E9PL57 170 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 LALBAP00709 142 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 COL6A2P12110 1019 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CKMT2P17540 419 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 EN1Q05925 392 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF235Q14590 738 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RCOR3Q9P2K3 495 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CYB5R1Q9UHQ9 305 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TNPO3Q9Y5L0 923 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLIT3O75094 1523 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ALKQ9UM73 1620 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 EI24O14681 340 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC9A3R1O14745 358 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ATE1O95260 518 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 INHAP05111 366 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NDST2P52849 883 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 B2MP61769 119 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SPRED3Q2MJR0 410 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF792Q3KQV3 632 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 MCPH1Q8NEM0 835 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC2A14Q8TDB8 520 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF69Q9UC07 566 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RNF225M0QZC1 329 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SMIM6P0DI80 62 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 IL1R1P14778 569 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 JUNBP17275 347 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ITGA3P26006 1051 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 AIMP2Q13155 320 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PUM1Q14671 1186 aaKnown RBP eCLIP4.88□□□□□ -1.639e-7■□□□□ 9.3
VPS13D-213ENST00000613099 AADACL4Q5VUY2 407 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZDHHC24Q6UX98 284 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 Q8N402 240 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZFP90Q8TF47 636 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 UFD1Q92890 307 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NKD2Q969F2 451 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC19A3Q9BZV2 496 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 INIPQ9NRY2 104 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NUFIP1Q9UHK0 495 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 PCYT1BQ9Y5K3 369 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 A0A1B0GUL6 1792 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RSL1D1O76021 490 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 RAB8AP61006 207 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SP4Q02446 784 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 BCL2A1Q16548 175 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms