RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 CCDC50Q8IVM0 306 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 TMEM151BQ8IW70 566 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 SPATA22Q8NHS9 363 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 FCRL5Q96RD9 977 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 CD180Q99467 661 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 CEP41Q9BYV8 373 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 SOHLH2Q9NX45 425 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
LINC00116-203ENST00000611969 SAE1Q9UBE0 346 aaPredicted RBP13.37□□□□□ -0.27
LINC00116-203ENST00000611969 ITGB1BP2Q9UKP3 347 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 PSMD13Q9UNM6 376 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
LINC00116-203ENST00000611969 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 APOC4-APOC2K7ER74 178 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 KCNJ13O60928 360 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 ZBTB11O95625 1053 aaPredicted RBP13.36□□□□□ -0.27
LINC00116-203ENST00000611969 MT-CYBP00156 380 aaPredicted RBP13.36□□□□□ -0.27
LINC00116-203ENST00000611969 APOC2P02655 101 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 ALPPP05187 535 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 HALP42357 657 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 WNT3AP56704 352 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 FOXL2P58012 376 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 MPP3Q13368 585 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 RPE65Q16518 533 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 PCSK7Q16549 785 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 CCDC181Q5TID7 509 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 FJX1Q86VR8 437 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 TRAPPC5Q8IUR0 188 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 GALNT16Q8N428 558 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 OR1L3Q8NH93 324 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 BRSK1Q8TDC3 778 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 AGPAT4Q9NRZ5 378 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 BTRCQ9Y297 605 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 ZNF711Q9Y462 761 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
LINC00116-203ENST00000611969 SEC16AO15027 2179 aa13.36□□□□□ -0.27
LINC00116-203ENST00000611969 KLF7O75840 302 aaPredicted RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 ANXA9O76027 345 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 CDK14O94921 469 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 SNRPB2P08579 225 aaKnown RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 PECAM1P16284 738 aaPredicted RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 BPIP17213 487 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 HLA-DPA1P20036 260 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 ITGA3P26006 1051 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 NAP1L1P55209 391 aaKnown RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 KLHL35Q6PF15 583 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 MYO7BQ6PIF6 2116 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 GDF7Q7Z4P5 450 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 ZNF567Q8N184 647 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 GRHL3Q8TE85 626 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 HAUS1Q96CS2 278 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 PPP1R2P1Q96PQ5 205 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 IMP3Q9NV31 184 aaKnown RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 HRASLS2Q9NWW9 162 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 NOVA2Q9UNW9 492 aaKnown RBP13.35□□□□□ -0.27
LINC00116-203ENST00000611969 ANKRD12Q6UB98 2062 aa13.35□□□□□ -0.27
LINC00116-203ENST00000611969 HEATR9A2RTY3 570 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 TMEM150CB9EJG8 249 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 H7C0C1 242 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 STK10O94804 968 aaKnown RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 MTHFD1P11586 935 aaKnown RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 VCLP18206 1134 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 CTNNA1P35221 906 aaKnown RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 PTPN7P35236 360 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ATP5OP48047 213 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 RWDD2BP57060 319 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ADCY2Q08462 1091 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 HIF1AQ16665 826 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 TMTC4Q5T4D3 741 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ZNF385CQ66K41 422 aaPredicted RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ITPRIPL1Q6GPH6 555 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 KDELC1Q6UW63 502 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 OOSP2Q86WS3 158 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 ZADH2Q8N4Q0 377 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 CLEC1AQ8NC01 280 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 QKIQ96PU8 341 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 TRAPPC9Q96Q05 1148 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 WDR77Q9BQA1 342 aaPredicted RBP13.34□□□□□ -0.27
LINC00116-203ENST00000611969 UBP1Q9NZI7 540 aa13.34□□□□□ -0.27
LINC00116-203ENST00000611969 OR6C74A6NCV1 312 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 SLC9B1P1A6NJY1 282 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 PJA2O43164 708 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 GPR39O43194 453 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 LDB2O43679 373 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 TJP3O95049 919 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 EDN3P14138 238 aa13.33□□□□□ -0.28
LINC00116-203ENST00000611969 NFKB1P19838 968 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms